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ZIRC
ZFIN ID: ZDB-GENE-000616-16
Gene Name: heat shock transcription factor 1
Gene Symbol: hsf1
Sequence Ontology ID : SO:0001217

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Previous Names: hsf1a, hsf1b, HSF1c (1), zHSF1a, zHSF1b

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
AUTOMATED DESCRIPTION
Exhibits sequence-specific DNA binding activity. Involved in lens development in camera-type eye and response to heat. Predicted to localize to the nucleus. Human ortholog(s) of this gene implicated  ...
GENE EXPRESSION
All Expression Data: 9 figures from 5 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb286 Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb287 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb294 Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 8 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH hsf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hsf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to heat (more)
    Cellular Component nucleus (more)
    Molecular Function sequence-specific DNA binding (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA hsf1-005 (1) 753
    mRNA hsf1-201 (1) 3570
    hsf1-203 (1) 3648
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hsf1 No data available
    MARKER RELATIONSHIPS
    hsf1 Contained in: [BAC] CH211-80H18 (1) (order this), CH211-251G8 (1) (order this)
    hsf1 Encodes: [cDNA] MGC:162121 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131600 (1) 2377 bp
    Genomic GenBank:BX255894 (1) 180950 bp
    Select Tool
    Polypeptide UniProtKB:Q9IAS0 (1) 538 aa
    Sequence Clusters UniGene:131556 (1)
    Sequence Information (all 28)
    ORTHOLOGY for hsf1 ( Chr: 19 )
    CITATIONS (44)