Gene

smx5

ID
ZDB-GENE-000616-10
Name
smx5
Symbol
smx5 Nomenclature History
Previous Names
  • wu:fe48h10
  • zgc:101795
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to contribute to RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to Lsm1-7-Pat1 complex; P-body; and nucleus. Orthologous to human LSM2 (LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated).
Genome Resources
Note
None
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
No data available
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smx5 Human Ortholog
No data available
Associated With smx5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001163 LSM domain, eukaryotic/archaea-type
Family IPR016654 U6 snRNA-associated Sm-like protein LSm2
Homologous_superfamily IPR010920 LSM domain superfamily
Domain Details Per Protein
Protein Length LSM domain, eukaryotic/archaea-type LSM domain superfamily U6 snRNA-associated Sm-like protein LSm2
UniProtKB:A0A2R8QU40 100
UniProtKB:A0A0R4IES0 70
UniProtKB:A0A2R8QEH4 89
UniProtKB:A0A0R4IWH4 34
UniProtKB:Q5RKP8 95
UniProtKB:Q9IAB6 53
UniProtKB:A0A0R4IA70 76
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Gene Tree
Ensembl
Citations