ZFIN ID: ZDB-GENE-000616-10
Gene Name: smx5
Gene Symbol: smx5
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fe48h10, zgc:101795

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6903941]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH smx5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH smx5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mRNA processing (more)
Cellular Component nucleus (more)
Molecular Function RNA binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001163 (1)
  • InterPro:IPR010920 (1)
  • InterPro:IPR016654 (1)
  • Pfam:PF01423 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smx5-001 (1) 752
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smx5 No data available
    MARKER RELATIONSHIPS
    smx5Contained in: [BAC] CH73-14H10 (1) (order this), DKEYP-30B3 (1)
    smx5Encodes: [EST] fe48h10 (1), IMAGE:6903941 (1) (order this)
    [cDNA] MGC:101795 (1) (order this), MGC:173750 (1) (order this), MGC:191610 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131496 (1) 1144bp
    Genomic GenBank:CR847938 169257bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QU40 (1) 100aa
    Sequence Clusters UniGene:75582 (1)
    Sequence Information (all 31)
    OTHER smx5 GENE PAGES
  • Alliance (1)
  • Gene:57924 (1)
  • VEGA:OTTDARG00000032906 (1)
  • ORTHOLOGY for smx5 (Chr: 6)
    CITATIONS (16)