ZFIN ID: ZDB-GENE-000523-2
Gene Name: POU class 4 homeobox 1
Gene Symbol: pou4f1
Sequence Ontology ID : SO:0000704

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Previous Names: brn3.0, brn3a (1), brn3b-pen (1), etID22526.1 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 10 figures from 9 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  cranial ganglion, epithalamus, habenula, inferior olive (all 12) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31497 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-pou4f1 (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pou4f1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000327 (1)
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR010982 (1)
  • InterPro:IPR013847 (1)
  • InterPro:IPR015584 (1)
  • InterPro:IPR017970 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00035 (1)
  • PROSITE:PS00465 (1)
  • PROSITE:PS50071 (1)
  • PROSITE:PS51179 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF00157 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pou4f1
    Tg(pou4f1-hsp70l:GFP), tg(pou4f1-hsp70l:gfp-cre)
    MARKER RELATIONSHIPS
    pou4f1Encodes: [cDNA] MGC:65880 (1) (order this), MGC:77341 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201285 (1) 2715bp
    Polypeptide UniProtKB:F1Q813 (1) 368aa
    Sequence Clusters UniGene:26981 (1)
    Sequence Information (all 20)
    OTHER pou4f1 GENE PAGES
  • Alliance (1)
  • Gene:58057 (1)
  • Ensembl(GRCz10):ENSDARG00000005559 (1)
  • ORTHOLOGY for pou4f1 (Chr: 6)
    CITATIONS (34)