ZFIN ID: ZDB-GENE-000523-2
Gene Name: POU class 4 homeobox 1
Gene Symbol: pou4f1

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Previous Names: brn3.0, brn3a (1), brn3b-pen (1), etID22526.1 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 8 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  cranial ganglion, epithalamus, habenula, inferior olive (all 11) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31497 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pou4f1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000327 (1)
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR010982 (1)
  • InterPro:IPR013847 (1)
  • InterPro:IPR017970 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00035 (1)
  • PROSITE:PS00465 (1)
  • PROSITE:PS50071 (1)
  • PROSITE:PS51179 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF00157 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pou4f1
    Tg(pou4f1-hsp70l:GFP), Tg(pou4f1-hsp70l:GFP-Cre)
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    pou4f1Encodes: [cDNA] MGC:65880 (1) (order this), MGC:77341 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001312866 (1) 2782bp
    Polypeptide UniProtKB:F1Q813 (1) 368aa
    Sequence Clusters UniGene:26981 (1)
    Sequence Information (all 18)
    OTHER pou4f1 GENE PAGES
  • Gene:58057 (1)
  • Ensembl(GRCz10):ENSDARG00000005559 (1)
  • ORTHOLOGY for pou4f1 (Chr: 6)
    Species Symbol Chromosome Accession # Evidence
    Human POU4F1 13
  • Gene:5457
  • OMIM:601632
  • HGNC:9218
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Pou4f1 14
  • MGI:102525
  • Gene:18996
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (30)