ZFIN ID: ZDB-GENE-000523-2
Gene Name: POU class 4 homeobox 1
Gene Symbol: pou4f1
Sequence Ontology ID : SO:0000704

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Previous Names: brn3.0, brn3a (1), brn3b-pen (1), etID22526.1 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 8 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  cranial ganglion, epithalamus, habenula, inferior olive (all 11) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31497 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-pou4f1 (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pou4f1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000327
  • InterPro:IPR001356
  • InterPro:IPR009057
  • InterPro:IPR010982
  • InterPro:IPR013847
  • InterPro:IPR017970
  • PROSITE:PS00027
  • PROSITE:PS00035
  • PROSITE:PS00465
  • PROSITE:PS50071
  • PROSITE:PS51179
  • Pfam:PF00046
  • Pfam:PF00157
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pou4f1
    Tg(pou4f1-hsp70l:GFP), tg(pou4f1-hsp70l:gfp-cre)
    MARKER RELATIONSHIPS
    pou4f1Encodes: [cDNA] MGC:65880 (1) (order this), MGC:77341 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001312866 (1) 2726bp
    Polypeptide UniProtKB:F1Q813 368aa
    Sequence Clusters UniGene:26981 (1)
    Sequence Information (all 20)
    OTHER pou4f1 GENE PAGES
  • Gene:58057 (1)
  • Ensembl(GRCz10):ENSDARG00000005559 (1)
  • ORTHOLOGY for pou4f1 (Chr: 6)
    CITATIONS (31)