ZFIN ID: ZDB-GENE-000210-25
Gene Name: KH domain containing, RNA binding, signal transduction associated 1a
Gene Symbol: khdrbs1a    Nomenclature History

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Previous Names: fc91b01, khdrbs1, fa18g12, fa56c01, fj90g10, p62 (1), wu:fa18g12, wu:fa56c01, wu:fc91b01, wu:fj90g10 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have mRNA binding activity and poly(A) binding activity. Predicted to be involved in regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to nucleus. Is expressed in several structures, including digestive system; fin; integument; nervous system; and pleuroperitoneal region. Orthologous to human KHDRBS1 (KH RNA binding domain containing, signal transduction associated 1).
Genome Resources: Alliance (1),  Gene:30082 (1),  Ensembl(GRCz11):ENSDARG00000052856 (2)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH khdrbs1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH khdrbs1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of alternative mRNA splicing, via spliceosome (more)
Cellular Component nucleus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA khdrbs1a-201 (1)    Ensembl 2070
khdrbs1a-202 (1)    Ensembl 1541
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM khdrbs1a No data available
MARKER RELATIONSHIPS
khdrbs1a Contained in: [BAC] DKEY-41N20 (1) (order this)
khdrbs1a Encodes: [EST] fa18g12, fa56c01, fc59d02 (1) (order this), fc60h07 (1) (order this), fc91b01, fj90g10 (1), IMAGE:6893450 (1)
[cDNA] MGC:85955 (1), MGC:173899 (1)
khdrbs1a Has Artifact: [cDNA] MGC:113899
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_130925 (1) 2009 nt
Genomic GenBank:CR376783 (1) 205064 nt Blast at MegaBLAST
Polypeptide UniProtKB:A0A0R4ISK8 (1) 395 aa
Sequence Information (all 50)
ORTHOLOGY for khdrbs1a ( Chr: 13 )
CITATIONS (33)