Genomic Feature

ihb291

ID
ZDB-ALT-181112-4
Name
ihb291
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
China Zebrafish Resource Center (CZRC)    (order this)
Other Pages
Note
Between 150 bp to 165 bp of the wild-type rnf185 coding sequence, TGCTGTCATCAGTCTG, is mutated into CA. The mutated rnf185 codes for a truncated protein containing 69 aa, 49 aa of which is identical to wildtype rnf185.
Genome Browser
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Variants
Variant Type
Delins
Variant Location
Chr 5: 1059852 - 1059867 (GRCz11) (1) Details
Nucleotide change
TGCTGTCATCAGTCTG/CA
Variant Notes
Between 150 bp to 165 bp of the wild-type rnf185 coding sequence,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted / 16 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TGGCAAGCTCTCTGGAGAAAGTGAAACAGCTCACACTTAAGACAGTCTCCTAAACAACAACAGGACACGGCAGATTCTGCTCTTCTTGGCCTTGTGGCTGTTCATCAAGGCGATGACAAGGTTTGTCTAATGTCGGGTCGACCATGGCTTGTTATTATGTTTATATTGTATTACAGTGTAATGCCGGCTGTGTTTTTAAAACTAGAGCTTCCTTTGTGCTAGTGACGCATCTCTGTAAACCAATAGTGTTCAGCTGCGCGTCTCACTTCGCCTTTTGTTTACCCTTTAGTATAAGCACATCTCATGCATGTGTGTTTCTGTGTTGATGTTTAGGGTTGTGTTTAGTGGAGAATGGCCAGTGCAGCAGCCAGTGAGAGTTCTTCATCATCTTCATCATCATCAGCAGGAGCTGCCAATGGTCAATCAGCGGGAGAAAGTGGAGGTGGAGGAGCTCAGGACAGCACGTTTGAGTGTAACATCTGTCTGGACACATCTAAAGA
TGCTGTCATCAGTCTG/CA TGCGGACACCTCTTCTGGTGAGGCCCTCACAACAATAAACAGCTCTTGTTTGCACTGCACACGACATTCAGACATGACTGTGGGAATTTTTAGACCAGCGCAAGCCTAATTTCCACGCTTTGCGCCATTGTTTAAATAGAAAATCCATCCACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGGTCTATAGAGGAGGTGTGTTAAGGCGCATTGTTGGAGCGTTGCTATTCTGAGGAGCTAAAATAGACCAACAGCACCATTGACCAACTAAGAGCTGCTCTAGAGTCCAGCAGAGTGTGTTAGTTATGCACATATGCAGGTCTAAATGCTGAACACACACAGGATGATCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations