ZFIN ID: ZDB-GENE-040426-1977
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Gene Name: ring finger protein 185
Gene Symbol: rnf185
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:73070 (1)

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ubiquitin protein ligase activity and ubiquitin-like protein conjugating enzyme binding activity; predicted to be involved in ER-associated misfolded protein catabolic process and  ...
GENE EXPRESSION
Directly Submitted Expression Data: 4 figures (5 images) from Thisse et al., 2004 [MGC:73070]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb290 Small Deletion Unknown Unknown CRISPR
ihb291 Indel Unknown Unknown CRISPR
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rnf185 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rnf185 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process autophagy (more)
Cellular Component endoplasmic reticulum (more)
Molecular Function metal ion binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001841 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR017907 (1)
  • InterPro:IPR018957 (1)
    		•
  • PROSITE:PS00518 (1)
  • PROSITE:PS50089 (1)
    		•
  • Pfam:PF00097 (1)
    		•
  • EC:2.3.2.27 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rnf185-002 (1) 334
    Select Tool
    mRNA rnf185-201 (1) 952
    Select Tool
    aberrant processed transcript rnf185-202 (1) 933
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rnf185 No data available
    MARKER RELATIONSHIPS
    rnf185Contained in: [BAC] CH73-324K12 (1) (order this)
    [Fosmid] ZFOS-128G4 (1)
    rnf185Encodes: [EST] fa31e09 (1)
    [cDNA] MGC:73070 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213037 (1) 944bp
    Select Tool
    Genomic GenBank:FP102032 (1) 87942bp
    Select Tool
    Polypeptide UniProtKB:Q6PC78 (1) 194aa
    Select Tool
    Sequence Clusters UniGene:11136 (1)
    Sequence Information (all 16)
    OTHER rnf185 GENE PAGES
  • Alliance (1)
  • Gene:406310 (1)
  • VEGA:OTTDARG00000037861 (1)
  • Ensembl(GRCz11):ENSDARG00000032997 (2)
    • ORTHOLOGY for rnf185 (Chr: 5)
    CITATIONS (22)