Genomic Feature

sdu24

ID
ZDB-ALT-180516-8
Name
sdu24
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
De-Li Shi Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 2: 33193795 - 33193796 (GRCz11) (1) Details
Nucleotide change
GC/-
Variant Notes
Between 101 bp to 102 bp of the wild-type rnf220a coding sequence, GC is  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AGTTCACCTCTGAGCCCTATCACGTCACTGTCGTGTTTTGTGACCCATCTTTCTTGCTTCTGTAAAATCCATGGTTAGAGACGCCTACTGGCCTTAAGCTAAATCTGTAAAGGATTCTGATACATGTGGGATGTTTTATGTGGGATTTATATTGCTTCATCTTTTAGAATGCTCTCTTTTAATCTTGTATCTCCTGTGATGTCCTATTTTGCCTTCATTAGCTGCTGTTGATCTCAAATTTTAGTGAAAATGAGTGTGATTAAAAATAGACAATTTTCTATTATTATTGTGTAATAATAAAATATTTAGTTTAATGTATAGTTTAATTTCATTAGTATTAAAAAGGAAAATGATTAAACATTATAATGGCCTTTGGTTTAGTGGTGCATTTATATTTATTTTATTCTCAGTGCCTATTTGTGGTGTTTATGATCACATTGATTTATCCCCTTGTGTCTGTCTTTTCTTCTGTGCTGCAGCCCGGATTGGGAAAATGAAGC
GC/- CGGAAGCCTGAGGATGGACAGGTATGTCCACTGTGCAGCGCCCCGCTGGCAGGGACAGAGGAGGAAATGAGTAGGCATGTGGAACAATGTCTGTTCAAGGTAGCTTCATGAACCCAGAGATCTGGGAATCCAACCTCCTCTAGAAAGTTTGGCCTTTCTGCCCTCACCTTTCCCTGGACATCAGCATCTGACAGACATCAGCATCTGACAAAGCATACACACATACATACAGTATGCAAAAAAATCTCCTTGATTTACTACAACTATGTTCTCCTACATGGGTGTCCAGGGAACAGTTGAAGGATTAGCTCTTTCCTAAAGTTTCCTCCTCCTCCTGCACTTTAGCACATTTGTTTGGCAGTTTCGGTGTCCTGAACCAACTTCAAAGATGTTCTGCATTATTGTCCTTTGGTAATGAGTTCAAAAAGAAAACTGTTGTTCAAACAGTCTGACTGGCTTCCCATTTTAGTGGTTCAGGATGCAGCACTTGCCCATTATAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations