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ZIRC
ZFIN ID: ZDB-GENE-060929-1006
Gene Name: ring finger protein 220a
Gene Symbol: rnf220a    Nomenclature History

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Previous Name: zgc:153254

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity and ubiquitin-protein transferase activity. Orthologous to human RNF220 (ring finger protein 220).
Genome Resources: Alliance (1),  Gene:561654 (1),  Ensembl(GRCz11):ENSDARG00000060929 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014913Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la023610Tg Transgenic Insertion Unknown Unknown DNA
    la028794Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028795Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19803 Point Mutation Unknown Missense, Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sdu24 Small Deletion Exon 3 Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-rnf220a 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rnf220a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rnf220a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript rnf220a-205 (1)    Ensembl 855
    mRNA rnf220a-201 (1)    Ensembl 1614
    rnf220a-202 (1)    Ensembl 1734
    rnf220a-203 (1)    Ensembl 762
    rnf220a-204 (1)    Ensembl 694
    rnf220a-206 (1)    Ensembl 604
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rnf220a No data available
    MARKER RELATIONSHIPS
    rnf220a Contained in: [BAC] CH211-236L6 (1) (order this), CH211-285I13 (1) (order this)
    rnf220a Encodes: [cDNA] MGC:153254 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001076570 (1) 1668 bp
    Genomic GenBank:BX324218 (1) 153650 bp
    Select Tool
    Polypeptide UniProtKB:A8WHS2 (1) 577 aa
    Sequence Clusters UniGene:138949 (1)
    Sequence Information (all 49)
    ORTHOLOGY for rnf220a ( Chr: 2 )
    CITATIONS (20)