Genomic Feature

sdu7

ID
ZDB-ALT-180129-8
Name
sdu7
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
De-Li Shi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 4449041 - 4449329 (GRCz11) (1) Details
Nucleotide change
CCGGCGATCAATCGCACTATATACCCGATCGACACAAACATGTAGCACGCCGAGAGGAAAATAATAGGGCGCTCTGGGTATTTAAACCGCTCCATGTCGATTAGGAAGGTGGCGACTGTGGCGAAGGTGGATATGAAGCACAACACGGACCAAAGTCCGATCCAGAAGGCCGTAAAAGTCCGCTCATCCTGCGTAAAATATGGGTTGTGACATGGCATGGCGCAGTTTGGGATTTGACCCGTCTTAACGCGGTTGTAGAGCGGGTGTCGATCGCTGTTCACCGGCACCA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
289 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AGAGCACCGTGAAAATCCCAATTCGGATCATCAGCTTCTCCAGCTTGTCCGTTTTAGTGCCCCCCTGTTTAATGACACTCCTGATCCTAAAAAGCGACACAAATCCAGCCAAAAGAAACATGGTGCCTATAAATAGGTATATGACCAGGGGGGCCAGCACGAAGCCCCGCAGATTGTCCAAGTTCTGGTTGCCAACGTAGCAGATCCCGGCGACCGGATCTCCGTCCACCGAGCTCAGCGCGAGGACGGCTATAGACTTCATGGACGGGATGAGCCAAGCGGCCAGGTGAAAGTACTGAGAGTAGCCCGCGATGGCCTCGTTTCCCCACTTCATGCCCGCCGCGAGGAACCAGGTGAGCGAGAGGATGACCCACCATATGGAGCTGGCCATTCCGAAGAAGTAGATAAGCAGGAACACAACGGTGCACAACGCGGGGCCGGTGGTCTCGTAGTGAATGTGCTCCACGTCATACTCCCGATTGCACGCCACTTTTTCGTGC
CCGGCGATCAATCGCACTATATACCCGATCGACACAAACATGTAGCACGCCGAGAGGAAAATAATAGGGCGCTCTGGGTATTTAAACCGCTCCATGTCGATTAGGAAGGTGGCGACTGTGGCGAAGGTGGATATGAAGCACAACACGGACCAAAGTCCGATCCAGAAGGCCGTAAAAGTCCGCTCATCCTGCGTAAAATATGGGTTGTGACATGGCATGGCGCAGTTTGGGATTTGACCCGTCTTAACGCGGTTGTAGAGCGGGTGTCGATCGCTGTTCACCGGCACCA/- TCGGCGCGCGACACTGGCAGCCCGGCTCGCAGGGCTTATTCTTATTGGGTCCGACGCCTGGCCGCCCGCTTTTCTTTTTGTGCGGATTAATGGCTTTGCTGGGGTAGTTGGTGGGTTTGGACAGCACCGGCGACACTGTGGTGGAGTCGGTTCGGTTGTAGTCCATGCACAGCGTGTCTGGGGCTCCTTGCACGGGCAGTAGATCGCACCTCATCCGATCCGGCCAAGGGAAGCCGTATTGCCGCATGAGCGGGGCGCAGCCCGCCTTGGCTCTCTCGCAGACGCTCCGGCACGGCGGAAGGGGTTTCTTATAGTCCTCCAGGCATATCGGGGTGTACATGCTGCACAAGAAGAACTTGAGATCCGGGGAGCACTGAATCTCCACCAGAGGCCAGAACTGGTGCACCTCCAAGCCGGCTTCATCCTGCGTGTCGTGGTTGAACTGGTTGGGCATGTAGGTGTAGTTATAACCGATGCCCTTGCACAGCGGAACGGCGATC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations