Genomic Feature
hg54
- ID
- ZDB-ALT-170809-22
- Name
- hg54
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Sood Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 25: 8457427 - 8457434 (GRCz11) (1) Details
- Nucleotide change
- CATTCGGA/-
- Variant Notes
-
Deletion 8 bp in exon 13, cDNA: 1205delCATTCGGA,
p. P402QfsX11.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted in Exon 13 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AATACTGCAAGACCCAAACCACACACACACACACACACACAGTTAATAGTATAATTTGTTTTTATTATTAAAGATAAAGATGGCTAGAATATGAGAATGATGTATGTTTTACATTAACAAAGCGTCTTGTGTCAGTGTGCTTGTTTTTAAAAAGAAATCTTCAATCAACATTCAAAATGCCTATATTACCCATAACCCTTAGGTATTTGAGTTCCTGAAGGGCGCCATCACTAAAAACTTCAAGGATGATCAGATTCAGAACAGCTCAAAGTTTCTGCAGGATCTCCTGCCGCAGTTTAGCAGCGTCTCTGACATGATTCTGGACACTGTCAAAAACAGGTCAGGTTTAACTATTTTTTAAATGTCTTTCTTTATTTGTTCTTATCATTTAGTGTGACATTATCTCTTTATCTGCAGTGTGTTCGGCTGGGATCATGTCACTCAGGGTCTGGTGCAACTTGGATTTATCCTGATGGACTCATTCGGCCCTAAACCAGGAC
CATTCGGA/- AAGGTGACAGAAGGAACGTCAAGTACGGCTAAAACACCAAACCAGCTAGCATGTAGACTTGGTGGACAAGTTCTCCTGGAGAGCTTTAAGGTAGAGTACAAGCAGTCATAAATCCATTAATCATGCTTCACATTTGGGAAATTAAATCTTTGTGTTGCTCTTTTATGCACAGATGCATGAACCAATCAGAGGCGAGATACTTGAACAAGTCTTGAACCGATTGGTTACTAAAACAGCCTCTCCTGTCACCCATTTCATTGGTTAGAAAACATATTTATGCAGATTCATGCTAGCTACCTATTGAATGTCTCATTTACGTCTATCTGCTGTGTTCTTCTTGCCGCAGACCTTCTTTCCAGCATAGTGTTGTCTGCTCCCATGATCCTCTTGGAATCTTCCTCTAAGGTCACAGAAACATTTGACCAGCTCTCTTATTTGCCTCTTAGTACAGTACAGGGGCTCCTCAAAGCGGTGCAGGTAACATTTCAACCCTCATGAAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None