Genomic Feature

sm4a

ID
ZDB-ALT-170424-2
Name
sm4a
Synonyms
  • smu2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Wenqing Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 38087508 - 38087514 (GRCz11) (1) Details
Nucleotide change
GCTGATG/-
Variant Notes
mutant protein lacks the entire bZIP domain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TACTCGGTGCTGTTCTTGTCGACGTGTTTCTTGGATTTCCCTCGATCGCCAATCTTCATGGAGCCCCCCGGCAGGTGGCTGTGCTGGTGGTGCGGACTAGGTACGGGCGTCGGGGGAGGTGTGGGATGGCCCGGCTGGAGATGCATGGTGGTTTGCGCGCAGTGCGCGATCTGGTGCTGAAGGTAGGACAGATGCGGCGCGTGGTGTTGAGAGTGGTGGTAGGTGGGTGGCATCGAGTCGCCAAGCTCATCTTCCTCCCGAGGCTCTTGTTTGATGGCCACGGGTCTCATTCTTGCTTGGCTGTCGTAGATGGGTTCTAGTTTGGAAGAATCCATGTAGCCGTTCAGGCAGCCATACATCTGCGGGGCCCCCGGCGCGCCATTGGCACCGTGGTGGTAGTCGTAGTCTCCGCTCGCCAGTTTGAGCTTCTCTTGCTTGGAGCTGTTGTGGAATAAGTCAGCCAGGAACTCGTCGTTGAAGGCAGACGGATCAATGTAGGC
GCTGATG/- TCGATGGAGTTCTCGTTCTCGCAGATCTCGCTCAGGTCTCCAGCGGTGTCTTTGTAGATGTAGGGGTTCTGCTGATTCTGTACAAGGCTGGTCATTAGTGGCCGTGGGGCGACCTCGTAGAGGTTTGCTTGCTCCATGGAGTATCTAAAACCCGCCAGACATGGTGAAGAGCTCCGGGAATCCAGCTTGGTCGCAGTACCGGAGAAAGCCGTGCTGGCTGCAAGTTCTCTGGACAGGTGAGTAAGCAACCTGTCGTGACTGTGCACTTGGCGGTAAAGTGGATGCGAGTTTAAAGGCTGAAACGCCACACGGGATCTCCTTTAAGATGACACTTGCAACCTCAGTGTGTGAGCTTCACGTCTGTCAAGTACTTTTCTGAGTGCACTTATATAGTCTTTGGAGTTTGGAGGGCGGTCCTAATGCTTTCCTGAGTGATCTGTGCGCGAGAGCGCAGCGGACGCACTGATAGACCTAGAACTACATAAATGTTATTATTACCG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations