Genomic Feature

el574

ID

ZDB-ALT-160325-3

Name

el574

Synonyms

None

Affected Genomic Region

irx5a (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

TALEN1-irx5a

Lab of Origin

Crump Lab

Current Source

Other Pages

Alliance

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 7: 35708614 - 35708626 (GRCz11) (1) Details
Nucleotide change: GGGTCTCCATACG/-
Variant Notes: WT irx5a ... ACCCGTATGGAGACCCAGC

el574 irx5a . ACC - - - - - - - - ...
ZFIN Staff

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 13 bp deleted (1)
Transcript Consequence: None
Protein Consequence: None

Sequences

Flanking Sequence: AAGTGCAAAACACCATACGTCACCAGCAATTCTCAGTCCATAAGAAGTCAAATTAGAGGAGTTCAAGGTGATTATTATTTAAAGCAATTCTCCCATTATAAATAATATACCACCATTAACCAGCAATCAATTTTGCGCCCGGAGTGGAAACGACTGCGATGAAAAATTGATGATTTTTCCACAGACCTGCCTCTGTGTCTGTGGAGTCTCCCTTGTCCGTGGGCTTGTTTGGCTCGTCGTCGTCGTTTTTCTCTAGATCAATGTTTTCGTCCTCCTCCTCGTCTTCACTCCGGTTCCGTGGGGTCCAGGTCATCTTGTTCTCCTTTTTTAGCCTCCTCCTGGCGTTGGCGAACCAGGTGGACACTTGAGTGAGGGTCATTTTAGTGATGATGGCCAGCATGATCTTCTCGCCTTTGGTGGGGTACGGGTTTTTCCGGTGCTCGTTAAGCCAAGCTTTCAAAGTAGCTGTGGCGTCCCGGGTAGCATTCTTGCGGTAAGCT
GGGTCTCCATACG/- GGTACGAGCCCAGGGGAGCAGCATAAGGATGATACCCTATAGACCCGGCCATGCCTGTCGTGTGGTCATAAGGTGAGCTCTGCAAAGAGCCAAACCAATTGTTTCATTAGCAAAATATCACTTTGGACACCTGCGCACAATGCAGGATTGCTTTCAAATCGCTTACACAAACACTCAAAAGCCAGCATAAACAAACACACACACTTACGCACACACACATGCATGCCACATGTACACACTTTACGTCTAATTAATCGAAATTGTAAGTACAAGGCCGCGGGGTCACGTATTTTATCGTTTAATTTTGGCTAGATGCCTCATTTCACCCAAAAAGAATGACTGTAAAATACATTTTTACAACTTTCTTTCCAAATCCCCCTTCTTTGTTAATGATCATAAATCTCATTTCGACAGCTTTACTGACTTTTGACTATGTTTATTTTCAGATTAGCCAGCTAATTAGAAGTTACAGCTTTATGTAGGGTCATCTGACAGCGTGT
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations