Genomic Feature

ko333

ID
ZDB-ALT-160217-9
Name
ko333
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Kawahara Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 22: 21476756 - 21476769 (GRCz11) (1) Details
Nucleotide change
CTTGGTCTTCCCCA/-
Variant Notes
A 14-base pair deletion in s1pr3a, encodes for 22 correct amino acids from the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
14 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CACTGATGCAGAAAGCTATGTAGCTTTTGTCGTACAGTGGTAGGACAGTGGAGCAGGTGTGGACTCGGTCCAAACAGTTCCAACCGAGGCTTGGCAAGGCACTCAAGAGAACTGAAACTGCCCAGCAGGCTCCCAGGAGAGCTAGTAACCTTCCCCTTCCTGCGGTCTCACAAGGCCGCAAACGAACCATCGTCATGTGGCGCTCAATCCCAATAGCGAGCAAGCTAAAAGTCGAAGCGCTAAGTGCCACAAACATACTCCCCTCTCGCAGCAGCCACTGGCCAGGGCTGAGGAAAAAGGTATTACGGCCGGAGGTGAAGATGTTGACCACATATGCCACTCCAGCTAACAAGTCAGAAAGTGCCAGATTGCCGATGAGAAAGTACATGCGGCTGTGGAAGCGCTTGTTGCGCCATAGTGCCAGAAGGACAGTAATGTTCTCAATCACGATCAGAGCACAGATGCACATCAGGAAGGCCGTCTTACACATACCAGTGCTT
CTTGGTCTTCCCCA/- CTTGCCTGAGTGGTTGTAGTGGCTAACTATAACATCATTCATTCCAGGTTCAAGCTCGTCATCCATTTTCCACACGCTCTCCAAGTCCGCTTTTGAACAGCAGATGGCGTCGATTAGCAGCTTCCAGTGAAGTTGGACAAGGGATCCACTGCTTCACACATAATGACTCATGGAGGACCTAATTACAAAAAAAAGACAAATAAAATGTCATAGTCTCTCTGGAAATTTTGGCCTGAAGAAAACATTTAAACCTTTAGGTTTGCTAGTCGTTTATTTTCAGATTATCTAAGCAGAGGGAAACATGATGAAAACCTAAACAAATGATCTCAAACAAGCCAAATAAAGAGCCTGGGGACTGGCTGGCAGTTTTAGGTTTCTGAACCTGAAGTAAAACATGAGTTTTGTTCTGAGGTGGTATAATGAAGTTCACAATCAGATAACCTAAATGACAATACTGTATAATAGCCTACATATATCTGTCTTACAGTGACTACTACAAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations