header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-050208-347
Gene Name: sphingosine-1-phosphate receptor 3a
Gene Symbol: s1pr3a    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: s1pr3, si:dkeyp-31e2.1

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have sphingosine-1-phosphate receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to localize to the integral component of membrane. Is expressed in brain; eye; heart; pleuroperitoneal region; and solid lens vesicle. Orthologous to human S1PR3 (sphingosine-1-phosphate receptor 3).
Genome Resources: Alliance (1),  Gene:798390 (1),  Ensembl(GRCz11):ENSDARG00000042470 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ko333 Small Deletion Unknown Unknown TALEN
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
TALEN1-s1pr3a 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH s1pr3a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH s1pr3a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process G protein-coupled receptor signaling pathway (more)
Cellular Component integral component of membrane (more)
Molecular Function G protein-coupled receptor activity (more)
GO Terms (all 6)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA s1pr3a-201 (1)    Ensembl 1189
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM s1pr3a No data available
MARKER RELATIONSHIPS
s1pr3a Contained in: [BAC] DKEYP-31E2 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001082925 (1) 1189 bp
Genomic GenBank:BX470239 (1) 57202 bp
Select Tool
Polypeptide UniProtKB:Q1LX14 (1) 395 aa
Sequence Clusters UniGene:140241 (1)
Sequence Information (all 10)
ORTHOLOGY for s1pr3a ( Chr: 22 )
CITATIONS (18)