Genomic Feature

zf557

ID
ZDB-ALT-151012-10
Name
zf557
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Shuo Lin Lab
Current Source
Other Pages
Note
None
Genome Browser
>
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 24194253 - 24194264 (GRCz11) (1) Details
Nucleotide change
CTTCCCCGACCT/-
Variant Notes
Zhang et al (2014): TALEN target the boundary of the second intron and the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
12 bp deleted at Intron 2 - Exon 3 Splice Junction (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CACTTAAATTCATTATACACATGTAGGTGGTGTGTATGTGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACATACACACACACACACACACACACACACACACACACACACACACACACACACATACATACATACATACATACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACATACATACACATATTACACACATCTATCTATCTATATATATGGGATATGGAATGGACGAAAGTTACACTGATTCTATGCATGTCCATAAGCTATGATAAAACATGAAAAACTCACCAGCTCTGATGTAGAACCAGTTCTCATCACAGGGAGCCAACTCCTTATGCTTAGCAAGTTTGACAATGTCAACCCAATCTGGCACCTTCAG
CTTCCCCGACCT/- TTCAAAAGACAAGGGTTCATAATTAGCTAAAACACACACATGCTTTTATCACAAAGTCTCAAGCATGATTACACAGCAGTCAACTTTAGAAGTGGACCAAAAAAACGTTTCAAAATTGTCCCAAGACCAGGACTTGTTTAATGGTTTTAGGACAAATTTGATGAAAAGTTTTAACTCGGTTCAAATGTTAACTACTGAATTACAGCACGTTCAATCATCACTGAACATAAATATAAAATGTACTGACTTTTTGAGGAAGGCTGCCAGCGCCCGGACAAACTCCTGCTGGTTGACGTCTTTCACTGTTACACCACCTGGCATCTGAAAACGAATTAACATCAAAACCTATATTAATATTTAACAGTAAAGAAAACAAATCGCATAATACGTATAGAAAGCTAACATCGATGTGTTACTTTTTAATCAGTGTTCATGCACAATGTGGTTAGGGGCAGAACAAACCTTGCTGTTATCAGCAATACTTTATTTACAATATAATA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations