Genomic Feature

sa18340

ID
ZDB-ALT-131217-14371
Name
sa18340
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
European Zebrafish Resource Center (EZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Point Mutation
Variant Location
Chr 11: 37653692 (GRCz11) (1) Details
Nucleotide change
C/T
Variant Notes
stop codon within the motor domain, resulting protein is truncated at the amino  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
C>T (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCTAAACAATTCACGTTTGACGGGACTTATTATATAAACCACTCCACTGAAGAGGTCTACAACGAGATCGCGTATCCTCTGGTGGAGGTAATATTGATGTTTTTTTGTGTGTATGATTTAGCATGACTGTAAGAGTCTCTGTAGAGACACTTAACTTTCCAGTGTGTGTGTGTGTGAATGCCAATATGTGTGTTATCTGATACCTGTTGTCCTTTATCTGAAACTAAACACCATAGAGTTAAAATCAGTCACGGAAGTAACCTACAGCCCTTCTTATAATTGATTATTTACTAGATGTGCTTGTAAGCTGGGCCCTTAAGTCTCTATATATACAACACTGAGGACCTGAATATCTATCTATCCATCCATCCATCCGTCTGTCCGTCCGTCTATCTGTCTATCTCTGTCTGTCTGTCGTTCTTTCATCAGCCTTATATTCTCATTCTTTTGCGTTACAGGGTGTAACTGAGGGCTACAATGGGACCATTTTTGCTTATGGA
C/T AAACAGGCAGCGGCAAGTCGTTTACAATGCAAGGTGTACCAGATCCTCCTTCCCAGAGAGGAATCATCCCTAGAGCTTTTGAGCACATCTTTGAGACAATCCAGGTAACCAGTTTACAAAACAAAACATTTTTTTTTCTAAGAGTTTATTTGCAAATTCAGATGACTAAATTACATATACAGTTGAAGTCAGAATTATTAGCCCCCTTTTAATTTTAATTTTCTTTTTAAAATATTTCCCAAATGATTTTTAACAGAGCAATGACATTTTCACAGTATGTCTGATAATATTTTTTCTTCTGGAGTAAGTCTTATTTGTTTTATTTGGGCTAGAACAAAAGCAGTTATTAATTTTTTTAAACACTATTTTAAGGTCAAAATTATTAGCCCTTTTAAGCTAATTTTTTTCGATAATCTACAAAACAAACCATCATTGTACAATAACTTGCCTAATTACCCTAACCTGTCTAGTTCACCTTATTAACCTAGTTAAGCCTTTAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
kif17sa18340/sa18340Homozygous♀+/- ♂+/-Fig. 7 from Pooranachandran et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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