Genomic Feature

ya100

ID
ZDB-ALT-111007-2
Name
ya100
Synonyms
  • ago2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Giraldez Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 19: 41494548 - 41494637 (GRCz11) (1) Details
Nucleotide change
AGCTGGAGATGGCAAGAAACCCTCAATTGCTGCTGTAAGCCTGGCAAACCTCTGATATTTTAAGGCTGATAATGCTCATTGCACAATGCC/-
Variant Notes
This mutant contains a 90nt deletion created by a targeted zinc finger  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
90 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCCATTGATCATTCCAAACCTGTAAGACTTGGGTTATTCTTGGGAACAAAATTATCTCACTTTATTTTGTTAAGCAATTATATTCATTTATAGCAGCTCAGTCAATATGAATTGAGTTCACTACACCATATTGACCTTTTTCGGTCTAAGTTACTTTGACTTGCAATGGAAGGACAGAGATCTCAACAGATTTCATTACGTCTTAATTTGTGTTTCAAAGTTTAACCAAAAGTCGAATAGTTTGGGAACGATTTAAGGATGAGTTAATGATAAGAGAATTAAGATTTTTGTTTGAACCATCCTTTCAAAATGACAGAATAATACAGCTATTTTCTTTTTATTTACTTTTTATTTTATTTTTTTTTTACTTTAATTTTTTTGCACTCGTTATTATATATATTTTTTTAATTATTTATTTATTTATTTATTTATTTTTGTCTTAGGCCCTTGGTGTTCCAGCAACCAGTTATCTTTTTGGGTGCAGATGTGACTCATCCACC
AGCTGGAGATGGCAAGAAACCCTCAATTGCTGCTGTAAGCCTGGCAAACCTCTGATATTTTAAGGCTGATAATGCTCATTGCACAATGCC/- AAGCAGTGCTAATACCACAAATGTGACCAATTTCTACTTGAAGTACACGATTTAAGGCTTTTAATGGGTTTCAGAAATGTTTTTAAGTATAATAATTTTACACGTACGGCATTTAGGTCGTTGGCAGTATGGATGCCCACCCAAGCAGATACTGTGCCACAGTGCGGGTGCAGCAGCACCGGCAGGACATCATTCAGGATCTGGCAACCATGGTCAGAGAGTTACTCATCCAGTTCTACAAATCCACACGCTTCAAACCAACACGCATCATCTACTACAGAGACGGCATCTCTGAAGGCCAGTTTAACCAGGTAAGCTGCAGGACAAGATCTCTTGTTAATACATGCTAAGTAGTACTGCAATGTATTATTTGAAGGCGACCTATTATGCAAAAATTTATTTTGTAAGGGGTTTGTGTGGTAACAGTCTGTGAATAAAACCAGCTTCTAATGATAAAAATTTATTAATTCTATTTTTTTTTAATAATCACACCTAAGAAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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