Gene
colec12
- ID
- ZDB-GENE-030131-9807
- Name
- collectin sub-family member 12
- Symbol
- colec12 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Description
- Predicted to have low-density lipoprotein particle binding activity and pattern recognition receptor activity. Involved in vasculogenesis. Predicted to localize to extracellular matrix and extracellular space. Is expressed in several structures, including cardiovascular system; epidermis; mesoderm; musculature system; and periderm. Orthologous to human COLEC12 (collectin subfamily member 12).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- 10 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb377 (12 images)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Fukuda et al., 2011
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR018378 | C-type lectin, conserved site |
Domain | IPR001304 | C-type lectin-like |
Domain | IPR033989 | CD209-like, C-type lectin-like domain |
Family | IPR050111 | C-type lectin and snaclec domain-containing protein |
Family | IPR050149 | Collagen superfamily |
Homologous_superfamily | IPR016186 | C-type lectin-like/link domain superfamily |
Homologous_superfamily | IPR016187 | C-type lectin fold |
Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
Protein | Length | CD209-like, C-type lectin-like domain | Collagen superfamily | Collagen triple helix repeat | C-type lectin and snaclec domain-containing protein | C-type lectin, conserved site | C-type lectin fold | C-type lectin-like | C-type lectin-like/link domain superfamily |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M2BAJ9
|
740 | ||||||||
UniProtKB:A5PMY6
|
720 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
colec12-201
(1)
|
Ensembl | 4,850 nt |
Interactions and Pathways
No data available
Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
---|---|---|---|---|---|---|---|
Ab1-colec12 | polyclonal | IgG | Rabbit |
|
1 |
Plasmids
No data available