ZFIN ID: ZDB-GENE-000323-1
Gene Name: T-box, brain, 1b
Gene Symbol: tbr1b

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Previous Names: tbr1, zf-tbr1 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 19 figures from 12 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2005 [eu258]
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Adult (90d-730d, breeding adult)
  brain, diencephalon, dorsal telencephalon, inner ear (all 13) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb24 Small Deletion Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • ihb26 Small Deletion Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • sa10845 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34772 Point Mutation Unknown Splice Site ENU
    sa41554 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tbr1b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001699 (1)
  • InterPro:IPR008967 (1)
  • InterPro:IPR018186 (1)
  • InterPro:IPR032385 (1)
  • PROSITE:PS01264 (1)
  • PROSITE:PS01283 (1)
  • PROSITE:PS50252 (1)
  • Pfam:PF00907 (1)
  • Pfam:PF16176 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tbr1b-001 (1) 3855
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tbr1b
    Tg(tbr1:EYFP)
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    tbr1bContained in: [Fosmid] CH1073-192A6 (1) (order this)
    tbr1bEncodes: [EST] eu258 (1)
    [cDNA] MGC:175170 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001115090 (1) 3855bp
    Genomic GenBank:CU651665 (1) 37255bp
    Select Tool
    Polypeptide UniProtKB:B5DE34 (1) 676aa
    Sequence Clusters UniGene:10723 (1)
    Sequence Information (all 16)
    OTHER tbr1b GENE PAGES
  • Gene:58042 (1)
  • VEGA:OTTDARG00000034010 (1)
  • Ensembl(GRCz10):ENSDARG00000004712 (1)
  • ORTHOLOGY for tbr1b (Chr: 9)
    CITATIONS (42)