ZFIN Sequences for Gene: rfx2

ZFIN ID: ZDB-GENE-050227-4

ZFIN ID: ZDB-GENE-050227-4

SEQUENCE INFORMATION

Gene Name:	regulatory factor X, 2 (influences HLA class II expression)
Gene Symbol:	rfx2

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001013278 (1)	3689 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166837 (1)	3634 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166838 (1)	3619 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_068222937 (1)	3544 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01007500 (1)	6135 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC090314 (1)	3689 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI721391 (1)	587 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM259632 (1)	526 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI722184 (1)	522 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI325076 (1)	345 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX664738 (2)	180024 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR450804 (2)	91038 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000008 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:Q5EAP5 (1)	734 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BEC2 (1)	709 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BEA3 (1)	704 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AB32TWP7 (1)	679 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001013296 (1)	734 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166894 (1)	709 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166895 (1)	704 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_068079038 (1)	679 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH90314 (1)	734 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:Q5EAP5 (1)	734 aa	Select Tool ZFIN BLAST NCBI BLAST

rfx2 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-275D22 (1)	Genomic	GenBank:CR450804	91038	Select Tool MegaBLAST Ensembl
[BAC] DKEY-240A9 (1)	Genomic	GenBank:BX664738	180024	Select Tool MegaBLAST Ensembl

rfx2 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:91808 (1)	RNA	GenBank:BC090314	3689	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] cb7 (1)	RNA	GenBank:BI325076	345	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] cb133 (1)	RNA	GenBank:BM259632	526	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fd20b11 (1)	RNA	GenBank:AI721391	587	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI722184	522	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT