Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
21	37.1 cM	z7609	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
21	179.93 cR	Z7609	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
21	4276.0 cR	z7609	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z7809	SSLP	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
dlat	GENE	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
dixdc1b	GENE	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
ddx10	GENE	21	14.07 cR	Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
ncam1a	GENE	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.

OTHER MAPPING INFORMATION

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
IND	234,0,214		60.0
Forward Primer	GAACAGCGATGTGCTCAGTT
Reverse Primer	TGTGGATGTGCCTCCTGTTA
AB	216,202		60.0
Forward Primer	GAACAGCGATGTGCTCAGTT
Reverse Primer	TGTGGATGTGCCTCCTGTTA
EKW	202		60.0
Forward Primer	GAACAGCGATGTGCTCAGTT
Reverse Primer	TGTGGATGTGCCTCCTGTTA
TU	0,214		60.0
Forward Primer	GAACAGCGATGTGCTCAGTT
Reverse Primer	TGTGGATGTGCCTCCTGTTA