ZFIN ID: ZDB-SSLP-980528-781

Mapping Details

SSLP: z6880
PHYSICAL MAP AND BROWSER No data available
PHYSICAL MAPPING No data available

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
5 67.9 cM z6880 Boston MGH Cross (MGH) Fishman, Mark C. Data
5 279.59 cR Z6880 Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
5 5451.0 cR z6880 Goodfellow T51 (T51) Geisler, Robert Data
5 106.6 cM z6880 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z14143 SSLP 5 Grosser et al., 2002 Grosser, et al. (2002. Proc Natl Acad Sci, pre-published) report mapping ptgs1 to LG05 between z6880 and z14143 on the T51 mapping panel.
ptgs1 GENE 5 Grosser et al., 2002 Grosser, et al. (2002. Proc Natl Acad Sci, pre-published) report mapping ptgs1 to LG05 between z6880 and z14143 on the T51 mapping panel.
krt1-c5 GENE 5 Padhi et al., 2006 Padhi BK et al (Gene 368, 37-45) mapped the krt1-c5 gene to LG 5 near z6880.

OTHER MAPPING INFORMATION
Chr 5 Grosser et al., 2002 Grosser, et al. (2002. Proc Natl Acad Sci, pre-published) report mapping ptgs1 to LG05  ...
Chr 5 Padhi et al., 2006 Padhi BK et al (Gene 368, 37-45) mapped the krt1-c5 gene to LG 5 near z6880.
Primer Sets:
Strain Bandsize Restriction Enzyme Annealing Temperature [C]
IND 133,0,127 60.0
Forward Primer TTGAAATGTCACCGTTGCAT
Reverse Primer ATCATCAGCATGGTGCTCAA
AB 0,151 60.0
Forward Primer TTGAAATGTCACCGTTGCAT
Reverse Primer ATCATCAGCATGGTGCTCAA
TU 0,153 60.0
Forward Primer TTGAAATGTCACCGTTGCAT
Reverse Primer ATCATCAGCATGGTGCTCAA
EKW 0,169 60.0
Forward Primer TTGAAATGTCACCGTTGCAT
Reverse Primer ATCATCAGCATGGTGCTCAA