ZFIN ID: ZDB-SSLP-980528-260

Mapping Details

SSLP:	z1536

PHYSICAL MAP AND BROWSER No data available

PHYSICAL MAPPING No data available

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
14	21.4 cM	z1536	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
14	0.0 cM	z1536	Mother of Pearl (MOP)	Postlethwait, John H.	Data
14	307.0 cR	z1536	Goodfellow T51 (T51)	Geisler, Robert	Data
14	20.9 cM	z1536	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
fj82h06	EST	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
fb12a01	EST	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
fb57b01	EST	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
unp1106	STS	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
unp1272	STS	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
fc56f11	EST	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
z5435	SSLP	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
cdx1a	GENE	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
fk94e07	EST	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
fa02f07	EST	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
fb09d09	EST	14		Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
z11305	SSLP	14	2.0 cR	Davidson et al., 2006	Davidson and Zon (2006, Dev. Biol. 292(2):506-518) mapped cdx1a to LG14 using the goodfellow radiation hybrid panel.
csf1ra	GENE	14		Parichy et al., 2000	Parichy, et al. (2000. Dev 127:3031-3044.) mapped csf1r between z5435 and z1536. This map position is supported by them mapping panther^j4e1 to the same interval using a combination of half tetrad centromere linkage analysis and a 161 individual mapping panel. Mutant locus panther corresponds to csf1r.
z5435	SSLP	14		Parichy et al., 2000	Parichy, et al. (2000. Dev 127:3031-3044.) mapped csf1r between z5435 and z1536. This map position is supported by them mapping panther^j4e1 to the same interval using a combination of half tetrad centromere linkage analysis and a 161 individual mapping panel. Mutant locus panther corresponds to csf1r.
j4e1	Feature	14		Parichy et al., 2000	Parichy, et al. (2000. Dev 127:3031-3044.) used half tetrad centromere linkage analysis to map panther^j4e1 to LG14. They refined the location between z5435 and z1536 using a 161 individual mapping panel.
z5435	SSLP	14		Parichy et al., 2000	Parichy, et al. (2000. Dev 127:3031-3044.) used half tetrad centromere linkage analysis to map panther^j4e1 to LG14. They refined the location between z5435 and z1536 using a 161 individual mapping panel.

Chr 14	Parichy et al., 2000	Parichy, et al. (2000. Dev 127:3031-3044.) used half tetrad centromere linkage analysis to map ...
Chr 14	Parichy et al., 2000	Parichy, et al. (2000. Dev 127:3031-3044.) mapped csf1r between z5435 and z1536. This map ...

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	199		60.0
Forward Primer	GTGGCTGTAATGCGTTCAGA
Reverse Primer	GCACACATCTGGGGAAAACT
IND	201,199,213,195		60.0
Forward Primer	GTGGCTGTAATGCGTTCAGA
Reverse Primer	GCACACATCTGGGGAAAACT
TL	199,0		60.0
Forward Primer	GTGGCTGTAATGCGTTCAGA
Reverse Primer	GCACACATCTGGGGAAAACT
TU	213		60.0
Forward Primer	GTGGCTGTAATGCGTTCAGA
Reverse Primer	GCACACATCTGGGGAAAACT