Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
7	41.5 cM	z8693	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
7	2974.0 cR	z8693	Goodfellow T51 (T51)	Geisler, Robert	Data
7	76.5 cM	z8693	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z10441	SSLP	7		Alexa et al., 2009	Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to  ... Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to Z10441 and Z8693.
um22	Feature	7		Alexa et al., 2009	Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to  ... Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to Z10441 and Z8693.
z11119	SSLP	7		Begemann et al., 2001	Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.
z11119	SSLP	7		Begemann et al., 2001	Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an  ... Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.
i26	Feature	7		Begemann et al., 2001	Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.
fb50h01	EST	7		Begemann et al., 2001	Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.
aldh1a2	GENE	7		Begemann et al., 2001	Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an  ... Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.
hu255H	Feature	7		van Rooijen et al., 2008	van Rooijen et al. (2008. J. Am. Soc. Nephrol. 19:1128-1138) reports mapping  ... van Rooijen et al. (2008. J. Am. Soc. Nephrol. 19:1128-1138) reports mapping hu255H to LG7, between SSLP markers z15270 and z8693.
z15270	SSLP	7		van Rooijen et al., 2008	van Rooijen et al. (2008. J. Am. Soc. Nephrol. 19:1128-1138) reports mapping  ... van Rooijen et al. (2008. J. Am. Soc. Nephrol. 19:1128-1138) reports mapping hu255H to LG7, between SSLP markers z15270 and z8693.
nz15	Feature	7	0.14 cM	Wingert et al., 2011	Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.
z4999	SSLP	7		Wingert et al., 2011	Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.
z11894	SSLP	7		Wingert et al., 2011	Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.
z1182	SSLP	7		Wingert et al., 2011	Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping. Wingert and Davidson report mapping n15 to Chr. 7 using meiotic mapping.

OTHER MAPPING INFORMATION

Chr 7 Begemann et al., 2001 Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls  ... Begemann, et al. (2001. Dev 128:3081-3094.) used bulk segregant analysis to demonstrate the nls mutant corresponds to a gene represented by an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.   Chr 7 Begemann et al., 2001 Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped  ... Begemann, et al. (2001. Dev 128:3081-3094.) report aldh1a2 corresponds to an EST (fb50h01) mapped between z11119 and z8693 on the LN54 mapping panel.   Chr 7 van Rooijen et al., 2008 van Rooijen et al. (2008. J. Am. Soc. Nephrol. 19:1128-1138) reports mapping hu255H to LG7, between  ... van Rooijen et al. (2008. J. Am. Soc. Nephrol. 19:1128-1138) reports mapping hu255H to LG7, between SSLP markers z15270 and z8693.   Chr 7 Alexa et al., 2009 Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to Z10441 and Z8693. Alexa et al. (2009.PLoS One 4(12):e8261) report mapping um22 to LG7, linked to Z10441 and Z8693.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,222		60.0
Forward Primer	GCTTTTTGAGCAGATGAGGC
Reverse Primer	CATGTACGCGTTGACTTTGC
IND	0,176		60.0
Forward Primer	GCTTTTTGAGCAGATGAGGC
Reverse Primer	CATGTACGCGTTGACTTTGC
TU	220,194,176		60.0
Forward Primer	GCTTTTTGAGCAGATGAGGC
Reverse Primer	CATGTACGCGTTGACTTTGC
EKW	0,222		60.0
Forward Primer	GCTTTTTGAGCAGATGAGGC
Reverse Primer	CATGTACGCGTTGACTTTGC