ZFIN ID: ZDB-GENE-980526-527

ZFIN ID: ZDB-GENE-980526-527

Mapping Details

Gene Name:	activin A receptor type 1Ba
Symbol:	acvr1ba

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	23	30,722,346 - 30,744,730	GRCz12tu
NCBI Map Viewer	23	30,722,346 - 30,744,730	GRCz12tu
Ensembl	23	27,800,519 - 27,822,920	GRCz11
NCBI Map Viewer	23	27,800,519 - 27,822,920	GRCz11
UCSC	23	-	GRCz11
Vega	23	27,873,978 - 27,896,379	GRCv10

Mapped Clones containing acvr1ba
CH211-169D8	Chr: 23 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hu3520	23	30,729,381	GRCz12tu	DIRECT		Sealy et al., 2025
	23	27,807,554	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	23	27,881,013	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	23	28,048,191	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa12061	23	30,727,491	GRCz12tu	DIRECT		Sealy et al., 2025
	23	27,805,664	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	23	27,879,123	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	23	28,046,301	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa12247	23	30,726,985	GRCz12tu	DIRECT		Sealy et al., 2025
	23	27,805,158	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	23	27,878,617	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	23	28,045,795	Zv9	DIRECT		Busch-Nentwich et al., 2013
t03pm	23	27,822,773 - 27,822,785	GRCz11	DIRECT		Preiß et al., 2022
hu3475	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
hu3520	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa12061	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa12247	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
t03pm	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
23	114.8 cM	taram_a	Mother of Pearl (MOP)	Postlethwait, John H.	Data
23	282.99 cR	tarama	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
23	4234.0 cR	tarama	Goodfellow T51 (T51)	Geisler, Robert	Data
23	91.9 cM	tarama	Heat Shock (HS)	Woods, Ian G.	Data
23	64.21 cM	tarama	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
z4421	SSLP	23	Roman et al., 2002	Roman, et al. (2002. Dev 129:3009-3019.) report mapping acvrl1 to a 1 cM meiotic interval between z14967 and z4421 on LG23. Finer mapping places the gene in a 0.035 cM interval between SNP b82sp6 and the tarama gene. That gap was spanned by two BACs (BAC177k23 and BAC157p19).
z14967	SSLP	23	Roman et al., 2002	Roman, et al. (2002. Dev 129:3009-3019.) report mapping acvrl1 to a 1 cM meiotic interval between z14967 and z4421 on LG23. Finer mapping places the gene in a 0.035 cM interval between SNP b82sp6 and the tarama gene. That gap was spanned by two BACs (BAC177k23 and BAC157p19).
acvrl1	GENE	23	Roman et al., 2002	Roman, et al. (2002. Dev 129:3009-3019.) report mapping acvrl1 to a 1 cM meiotic interval between z14967 and z4421 on LG23. Finer mapping places the gene in a 0.035 cM interval between SNP b82sp6 and the tarama gene. That gap was spanned by two BACs (BAC177k23 and BAC157p19).

Chr 23

Roman et al., 2002

Roman, et al. (2002. Dev 129:3009-3019.) report mapping acvrl1 to a 1 cM meiotic interval ...

Markers Encoded by acvr1ba
fb75f01 Chr: 23 Details