ZFIN ID: ZDB-GENE-020531-2

Mapping Details

Gene Name:	aryl hydrocarbon receptor 1a
Symbol:	ahr1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	16	20,013,827 - 20,038,263	GRCz11
Ensembl	16	20,013,827 - 20,038,263	GRCz11
Vega	16	20,208,008 - 20,232,444	GRCv10
NCBI Map Viewer	16	20,009,154 - 20,038,263	GRCz11
UCSC	16	-	GRCz11
UCSC	16	-	GRCz11

Mapped Clones containing ahr1a
DKEY-242C17	Chr: 16 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
mu152	16	20,037,454 - 20,037,459	GRCz11	Sugden et al., 2017
mu153	16	20,037,455 - 20,037,468	GRCz11	Sugden et al., 2017
mu154	16	20,037,454 - 20,037,470	GRCz11	Sugden et al., 2017
sa1410	16	20,024,004	GRCz11	Busch-Nentwich et al., 2013
	16	20,218,185	GRCz10	Busch-Nentwich et al., 2013
	16	22,111,742	Zv9	Busch-Nentwich et al., 2013
sa16655	16	20,017,631	GRCz11	Busch-Nentwich et al., 2013
	16	20,211,812	GRCz10	Busch-Nentwich et al., 2013
	16	22,105,369	Zv9	Busch-Nentwich et al., 2013
sa28637	16	20,019,808	GRCz11	Busch-Nentwich et al., 2013
	16	20,213,989	GRCz10	Busch-Nentwich et al., 2013
	16	22,107,546	Zv9	Busch-Nentwich et al., 2013
uab139	16	20,014,909 - 20,014,913	GRCz11	Souder et al., 2019

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z3104	SSLP	16	29.44 cR	Hahn, 2005	mapped on the LN54 panel with PCR vectors as indicated: ahr1a (maps to LG16) 000001010000000000000000000010000001001011011110001100010000001000111110000000010000011001101 ahr1a Linkage group 16, 29.44 cR from Z3104 The best overall marker (in linkage group 16) is linked to the query marker with a LOD of 12.0 The best marker in the second-best linkage group (linkage group 19) is linked to the query marker with a LOD of 3.2

Chr 16

Andreasen et al., 2002

Andreasen et al. (2002) mapped ahr1 to LG 16 using the LN54 Radiation Hybrid panel.