ZFIN ID: ZDB-GENE-020418-2

ZFIN ID: ZDB-GENE-020418-2

Mapping Details

Gene Name:	SEC61 translocon subunit alpha 1a
Symbol:	sec61a1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	6	42,620,388 - 42,627,086	GRCz12tu
NCBI Map Viewer	6	42,620,388 - 42,627,086	GRCz12tu
Ensembl	6	40,065,201 - 40,071,899	GRCz11
NCBI Map Viewer	6	40,065,210 - 40,071,908	GRCz11
UCSC	6	-	GRCz11
Vega	6	40,067,665 - 40,074,363	GRCv10

Mapped Clones containing sec61a1a
DKEY-197J19	Chr: 6 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi1058Tg	6	40,071,646 - 40,071,647	GRCz11	DIRECT		ZFIN Curated Data
hi2839bTg	6	40,070,981 - 40,070,982	GRCz11	DIRECT		ZFIN Curated Data
sa31532	6	42,621,439	GRCz12tu	DIRECT		Sealy et al., 2025
	6	40,066,261	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	6	40,068,725	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	6	39,997,125	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa40755	6	42,624,393	GRCz12tu	DIRECT		Sealy et al., 2025
	6	40,069,215	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	6	40,071,679	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	6	40,000,079	Zv9	DIRECT		Busch-Nentwich et al., 2013
la011479Tg	6	40,002,678 - 40,002,688	Zv9	ZFIN_Zv9	BurgessLin
c163	6		GRCz11	GENERAL_LOAD	load data [singleton]
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	6		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	6		GRCz11	OTHER_MAPPING	linkagesDirectMem1
hi1058Tg	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
hi2839bTg	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
la011479Tg	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa31532	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa40755	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
z22745	SSLP	6	Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the ...
z7248	SSLP	6	Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the ...
c163	Feature	6	Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the ...

Chr 6	Golling et al., 2002	Adam Amsterdam (pers. comm.) reports that sec61a is mapped to LG6 on the T51 mapping panel.
Chr 6	Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the sec61al1 gene on Chr 6 ...

Markers Encoded by sec61a1a
fb62c11 Chr: 6 Details

Genomic Feature c163 is an allele of sec61a1a

Marker	Type	Chr	Publication / Person	Comments
sec61a1a	GENE	6	Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the ...
z22745	SSLP	6	Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the ...
z7248	SSLP	6	Doll et al., 2011	Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the ...

Genomic Feature c163 is an allele of sec61a1a

Chr 6

Doll et al., 2011

Doll, et al. (2011. Dev Biol. 360:44-57.) reports mapping mutant c163 to the sec61al1 gene on Chr 6 ...