ZFIN ID: ZDB-GENE-001207-1

Mapping Details

Gene Name: SPT5 homolog, DSIF elongation factor subunit
Symbol: supt5h
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 15 22,852,063 - 22,880,118 GRCz12tu
NCBI Map Viewer 15 22,852,063 - 22,880,118 GRCz12tu
Ensembl 15 20,364,595 - 20,395,249 GRCz11
NCBI Map Viewer 15 20,364,605 - 20,395,252 GRCz11
UCSC 15 - GRCz11
Vega 15 20,428,863 - 20,459,517 GRCv10
Mapped Clones containing supt5h
DKEY-46I14 Chr: 15 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
fh20 15 20,380,102 GRCz11 DIRECT Cooper et al., 2005
m806 15 20,386,193 GRCz11 DIRECT Guo et al., 2000
sa13309 15 22,859,136 GRCz12tu DIRECT Sealy et al., 2025
15 20,374,320 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 20,438,588 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 19,335,962 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42529 15 22,856,417 GRCz12tu DIRECT Sealy et al., 2025
15 20,371,548 GRCz11 DIRECT Busch-Nentwich et al., 2013
15 20,435,816 GRCz10 DIRECT Busch-Nentwich et al., 2013
15 19,333,190 Zv9 DIRECT Busch-Nentwich et al., 2013
sk8 15 20,373,663 GRCz11 DIRECT Keegan et al., 2002
la012689Tg 15 19,327,746 - 19,327,756 Zv9 ZFIN_Zv9 BurgessLin
fh20 15 GRCz11 GENERAL_LOAD load data [singleton]
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING linkagesDirectMem1
15 GRCz11 OTHER_MAPPING linkagesDirectMem2
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la012689Tg 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
m806 15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa13309 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa42529 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sk8 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
15 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z470 SSLP 15 Guo et al., 2000 Guo, et al. (2000. Nature 408:366-369.) report mapping supt5h to LG15 between z470 and z21452. Two AFLP markers were used to identify large clones spanning supt5h and a chromosome walk localized the gene.
z21452 SSLP 15 Guo et al., 2000 Guo, et al. (2000. Nature 408:366-369.) report mapping supt5h to LG15 between z470 and z21452. Two AFLP markers were used to identify large clones spanning supt5h and a chromosome walk localized the gene.
timm50 GENE 15 Guo et al., 2004 Gou et al. (2004, J. Biol. Chem. 279(23):24813-24825) report mapping timm50 to LG15 on the LN54 RH panel. It is near z25911, ppp1r14a and supt5h.
z25911 SSLP 15 Guo et al., 2004 Gou et al. (2004, J. Biol. Chem. 279(23):24813-24825) report mapping timm50 to LG15 on the LN54 RH panel. It is near z25911, ppp1r14a and supt5h.

OTHER MAPPING INFORMATION
Chr 15 Guo et al., 2000 Guo, et al. (2000. Nature 408:366-369.) report mapping supt5h to LG15 between z470 and  ...
Chr 15 Guo et al., 2004 Gou et al. (2004, J. Biol. Chem. 279(23):24813-24825) report mapping timm50 to LG15 on the  ...
Markers Encoded by supt5h
fb95e05 Chr: 15 Details
fc10f02 Chr: 20 Details
Genomic Feature fh20 is an allele of supt5h
Marker Type Chr Distance Publication / Person Comments
z20993 SSLP 15 Cooper et al., 2005  ...
z7871 SSLP 15 Cooper et al., 2005  ...
Genomic Feature fh20 is an allele of supt5h
Chr 15 Cooper et al., 2005 Cooper%2c+et+al%2e+%282005%2e+Dev%2e+Dyn%2e+234%3a651%2d658%29+reports+mapping+%3ci%3efh20%3c%2fi%3e  ...
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