ZFIN ID: ZDB-GENE-030131-8415

ZFIN ID: ZDB-GENE-030131-8415

Mapping Details

Gene Name:	collagen, type I, alpha 2
Symbol:	col1a2

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	19	43,612,713 - 43,631,831	GRCz12tu
NCBI Map Viewer	19	43,612,713 - 43,631,831	GRCz12tu
Ensembl	19	40,983,221 - 41,002,980	GRCz11
NCBI Map Viewer	19	40,983,221 - 41,002,336	GRCz11
UCSC	19	-	GRCz11
Vega	19	41,396,101 - 41,415,860	GRCv10

Mapped Clones containing col1a2
DKEY-104M9	Chr: 19 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
ca108	19	40,989,583	GRCz11	DIRECT	Rajan et al., 2020
cmg136	19	43,620,402	GRCz12tu	DIRECT	Vanhooydonck et al., 2025
cmg137	19	43,623,515	GRCz12tu	DIRECT	Vanhooydonck et al., 2025
cmg138	19	43,627,033	GRCz12tu	DIRECT	Vanhooydonck et al., 2025
ihb230	19	40,990,941 - 40,990,942	GRCz11	DIRECT	ZFIN Staff
sa1763	19	43,614,656	GRCz12tu	DIRECT	Sealy et al., 2025
	19	40,985,164	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	19	41,398,044	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	19	41,945,790	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa17981	19	43,617,039	GRCz12tu	DIRECT	Sealy et al., 2025
	19	40,987,547	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	19	41,400,427	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	19	41,948,173	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa32257	19	43,628,223	GRCz12tu	DIRECT	Sealy et al., 2025
	19	40,998,731	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	19	41,411,611	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	19	41,959,357	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa36897	19	43,628,712	GRCz12tu	DIRECT	Sealy et al., 2025
	19	40,999,220	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	19	41,412,100	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	19	41,959,846	Zv9	DIRECT	Busch-Nentwich et al., 2013
la013496Tg	19	41,949,461 - 41,949,471	Zv9	ZFIN_Zv9
ca108	19		GRCz11	OTHER_MAPPING	ZFIN Curated Data
dmh15	19		GRCz11	OTHER_MAPPING	ZFIN Curated Data
ihb230	19		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la013496Tg	19		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	99.1 cM	col1a2	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
dlx6a	GENE	19	Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...
z11403	SSLP	19	Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...
z6661	SSLP	19	Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...
z7265	SSLP	19	Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...

Chr 19

Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 between Z11403 and Z7265 ...

Genomic Feature cmg137 is an allele of col1a2