ZFIN ID: ZDB-GENE-990415-173

Mapping Details

Gene Name: notch receptor 1a
Symbol: notch1a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 21 5,645,319 - 5,713,901 GRCz12tu
NCBI Map Viewer 21 5,645,319 - 5,713,901 GRCz12tu
Ensembl 21 4,766,244 - 4,849,056 GRCz11
NCBI Map Viewer 21 4,766,244 - 4,849,029 GRCz11
UCSC 21 - GRCz11
Vega 21 4,601,679 - 4,684,491 GRCv10
Mapped Clones containing notch1a
CH1073-196N20 Chr: 21 Details
DKEY-102G19 Chr: 21 Details
CH73-286L20 Chr: 21 Details
CH1073-249F6 Chr: 21 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
bns135 21 4,802,309 - 4,802,324 GRCz11 DIRECT Gerri et al., 2018
hi3263Tg 21 4,848,437 - 4,848,438 GRCz11 DIRECT ZFIN Curated Data
hzm17 21 4,791,783 - 4,791,786 GRCz11 DIRECT Kozak et al., 2020
hzm18 21 4,818,034 - 4,818,135 GRCz11 DIRECT Kozak et al., 2020
ion34h 21 4,848,819 - 4,848,823 GRCz11 DIRECT Jin et al., 2022
sa32330 21 4,815,454 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 4,808,891 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 4,650,889 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 4,644,326 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 5,033,425 Zv9 DIRECT Busch-Nentwich et al., 2013
sa39316 21 5,654,831 GRCz12tu DIRECT Sealy et al., 2025
21 4,776,847 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 4,612,282 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 5,074,078 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43568 21 5,679,704 GRCz12tu DIRECT Sealy et al., 2025
21 4,800,273 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 4,635,708 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 4,320,293 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43576 21 5,655,587 GRCz12tu DIRECT Sealy et al., 2025
21 4,777,591 GRCz11 DIRECT Busch-Nentwich et al., 2013
21 4,613,026 GRCz10 DIRECT Busch-Nentwich et al., 2013
21 5,073,334 Zv9 DIRECT Busch-Nentwich et al., 2013
zf4088 21 4,791,760 - 4,791,763 GRCz11 DIRECT Zhong et al., 2023
zf4089 21 4,791,750 - 4,791,759 GRCz11 DIRECT Zhong et al., 2023
zf4090 21 4,791,754 - 4,791,772 GRCz11 DIRECT Zhong et al., 2023
zf4091 21 4,791,738 - 4,791,768 GRCz11 DIRECT Zhong et al., 2023
b420 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
b638 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
bns135 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
hi3263Tg 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
hzm17 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
hzm18 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
ion34h 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
notch1a_unspecified 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
p48egcq 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
p76emcf 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa32330 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa39316 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa43568 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa43576 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
tc225 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
tc239c 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
tc322b 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
th35b 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
tj247 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
tm145 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
to15e 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
tp37 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tw239 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tx201 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
zf3157 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf4088 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf4089 21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf4090 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf4091 21 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
21 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
21 491.0 cR notch Goodfellow T51 (T51) Geisler, Robert Data
21 25.5 cM notch Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by notch1a
fc37a05 Chr: 21 Details
fc01e02 Chr: 21 Details
Genomic Feature zf3157 is an allele of notch1a
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