ZFIN ID: ZDB-GENE-980526-260

Mapping Details

Gene Name:	GATA binding protein 2a
Symbol:	gata2a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	11	3,943,494 - 3,961,155	GRCz12tu
NCBI Map Viewer	11	3,943,494 - 3,961,155	GRCz12tu
Ensembl	11	3,847,883 - 3,865,472	GRCz11
NCBI Map Viewer	11	3,847,883 - 3,865,540	GRCz11
UCSC	11	-	GRCz11
Vega	11	3,828,496 - 3,846,085	GRCv10

Mapped Clones containing gata2a
CH211-63I20	Chr: 11 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
cz3crspr	11	3,859,855 - 3,859,865	GRCz11	DIRECT		Avagyan et al., 2021
um27	11	3,853,957 - 3,853,966	GRCz11	DIRECT		Kok et al., 2015
um307	11	3,852,334 - 3,852,775	GRCz11	DIRECT		Shin et al., 2019
cz3crspr	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	11		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
um27	11		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
um307	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	11		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
11	36.7 cM	gata2	Mother of Pearl (MOP)	Postlethwait, John H.	Data
11	87.24 cR	GATA-2	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
11	390.0 cR	gata2	Goodfellow T51 (T51)	Geisler, Robert	Data
11	5.1 cM	gata2	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	250		36.0
Forward Primer	ACCTGACTTCCCGTGAGGCGAGC
Reverse Primer	GGGTTAGGACAAAAGTTGGGAC

Genomic Feature um307 is an allele of gata2a