Mapping Details

Genome Browser Chr Position Assembly ZFIN 19 32,277,852 - 32,287,811 GRCz12tu NCBI Map Viewer 19 32,277,852 - 32,287,811 GRCz12tu Ensembl 19 29,808,699 - 29,818,648 GRCz11 NCBI Map Viewer 19 29,808,700 - 29,818,648 GRCz11 UCSC 19 - GRCz11 Vega 19 30,221,386 - 30,231,336 GRCv10

Mapped Clones containing hdac1
CH73-130A3	Chr: 19 Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	79.4 cM	hdac1	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
csnk2b	GENE	19		Nambiar et al., 2007	b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).
z9059	SSLP	19		Nambiar et al., 2007	b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).
z22532	SSLP	19		Nambiar et al., 2007	b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).
hey1	GENE	19		Nambiar et al., 2007	b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).
b382	Feature	19		Nambiar et al., 2007	b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).

OTHER MAPPING INFORMATION

Chr 19 Nambiar et al., 2007 b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).

Markers Encoded by hdac1
chunp6919 Chr: 19 Details
fb19h11 Chr: 19 Details

Genomic Feature rw399 is an allele of hdac1
Marker Type Chr Distance Publication / Person Comments z11872 SSLP 19 Yamaguchi et al., 2005 Yamaguchi et al. (2005, Development 32(13):3027-3043) Mapped hdac1rw399 between z11872 and z7235. z7235 SSLP 19 Yamaguchi et al., 2005 Yamaguchi et al. (2005, Development 32(13):3027-3043) Mapped hdac1rw399 between z11872 and z7235.

Genomic Feature t24411 is an allele of hdac1

Marker Type Chr Distance Publication / Person Comments z11872 SSLP 19 1.0 cM Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. z15237 SSLP 19 1.5 cM Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. t23715 Feature 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. t22925 Feature 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. z7235 SSLP 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel.

Genomic Feature t23715 is an allele of hdac1

Marker Type Chr Distance Publication / Person Comments z11872 SSLP 19 1.0 cM Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. z15237 SSLP 19 1.5 cM Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. t22925 Feature 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. z7235 SSLP 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. t24411 Feature 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel.

Genomic Feature t22925 is an allele of hdac1

Marker Type Chr Distance Publication / Person Comments z11872 SSLP 19 1.0 cM Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. z15237 SSLP 19 1.5 cM Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. z7235 SSLP 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. t24411 Feature 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel. t23715 Feature 19 Stadler et al., 2005 Stadler et al. (2005, Dev. Dyn. 233(3):883-889) have mapped several alleles of hdac1 to chromosome 19 on the MGH panel.

Genomic Feature b382 is an allele of hdac1

Marker Type Chr Distance Publication / Person Comments z9059 SSLP 19 0.6 cM Nambiar et al., 2007 b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).   z22532 SSLP 19 1.6 cM Nambiar et al., 2007 b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).   hey1 GENE 19 Nambiar et al., 2007 b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).   hdac1 GENE 19 Nambiar et al., 2007 b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).   csnk2b GENE 19 Nambiar et al., 2007 b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and  ... b382 was mapped to LG19 0.6cM south of Z9059 (6 recombinants out of 1004) and 1.6 cM north of Z22532 (17 recombinants out of 1004).

Genomic Feature rw399 is an allele of hdac1
Chr 19 Yamaguchi et al., 2005 Yamaguchi et al. (2005, Development 32(13):3027-3043) Mapped hdac1rw399 between  ... Yamaguchi et al. (2005, Development 32(13):3027-3043) Mapped hdac1rw399 between z11872 and z7235.

Genomic Feature b382 is an allele of hdac1
Chr 19 Nambiar et al., 2004 Nambiar and Henion (2004, Dev. Biol. 267(1):165-80) mapped col b382 to LG19 using SSLP on a  ... Nambiar and Henion (2004, Dev. Biol. 267(1):165-80) mapped col b382 to LG19 using SSLP on a half-tetrad panel.