ZFIN ID: ZDB-GENE-020531-2

Mapping Details

Gene Name:	aryl hydrocarbon receptor 1a
Symbol:	ahr1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	16	20,013,827 - 20,038,263	GRCz11
Ensembl	16	20,013,827 - 20,038,263	GRCz11
Vega	16	20,208,008 - 20,232,444	GRCv10
NCBI Map Viewer	16	20,009,154 - 20,038,263	GRCz11
UCSC	16	-	GRCz11
UCSC	16	-	GRCz11

Mapped Clones containing ahr1a
DKEY-242C17	Chr: 16 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
mu152	16	20,037,454 - 20,037,459	GRCz11	Sugden et al., 2017
mu153	16	20,037,455 - 20,037,468	GRCz11	Sugden et al., 2017
mu154	16	20,037,454 - 20,037,470	GRCz11	Sugden et al., 2017
sa1410	16	20,024,004	GRCz11	Busch-Nentwich et al., 2013
	16	20,218,185	GRCz10	Busch-Nentwich et al., 2013
	16	22,111,742	Zv9	Busch-Nentwich et al., 2013
sa16655	16	20,017,631	GRCz11	Busch-Nentwich et al., 2013
	16	20,211,812	GRCz10	Busch-Nentwich et al., 2013
	16	22,105,369	Zv9	Busch-Nentwich et al., 2013
sa28637	16	20,019,808	GRCz11	Busch-Nentwich et al., 2013
	16	20,213,989	GRCz10	Busch-Nentwich et al., 2013
	16	22,107,546	Zv9	Busch-Nentwich et al., 2013
uab139	16	20,014,909 - 20,014,913	GRCz11	Souder et al., 2019

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z3104	SSLP	16	29.44 cR	Hahn, 2005	mapped on the LN54 panel with PCR vectors as indicated: ahr1a (maps to LG16) 000001010000000000000000000010000001001011011110001100010000001000111110000000010000011001101 ahr1a Linkage group 16, 29.44 cR from Z3104 The best overall marker (in linkage group 16) is linked to the query marker with a LOD of 12.0 The best marker in the second-best linkage group (linkage group 19) is linked to the query marker with a LOD of 3.2

Chr 16

Andreasen et al., 2002

Andreasen et al. (2002) mapped ahr1 to LG 16 using the LN54 Radiation Hybrid panel.

Genomic Feature mu154 is an allele of ahr1a