ZFIN ID: ZDB-GENE-990415-122

Mapping Details

Gene Name:	pancreatic and duodenal homeobox 1
Symbol:	pdx1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	24	25,564,785 - 25,567,293	GRCz12tu
NCBI Map Viewer	24	25,564,785 - 25,567,293	GRCz12tu
Ensembl	24	21,684,189 - 21,686,706	GRCz11
NCBI Map Viewer	24	21,684,195 - 21,686,703	GRCz11
UCSC	24	-	GRCz11
Vega	24	21,539,015 - 21,541,532	GRCv10

Mapped Clones containing pdx1
CH211-140B10	Chr: 24 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
ion37h	24	21,684,545 - 21,684,554	GRCz11	DIRECT		Han et al., 2022
sa12	24	25,566,897	GRCz12tu	DIRECT		Sealy et al., 2025
	24	21,686,307	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	24	21,541,133	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	24	22,294,255	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa280	24	25,564,985	GRCz12tu	DIRECT		Sealy et al., 2025
	24	21,684,395	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	24	21,539,221	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	24	22,292,343	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa3263	24	25,564,985	GRCz12tu	DIRECT		Sealy et al., 2025
	24	21,684,395	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	24	21,539,221	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	24	22,292,343	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa37883	24	25,566,897	GRCz12tu	DIRECT		Sealy et al., 2025
	24	21,686,307	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	24	21,541,133	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	24	22,294,255	Zv9	DIRECT		Busch-Nentwich et al., 2013
uh10	24	21,684,575 - 21,684,576	GRCz11	DIRECT		Wiggenhauser et al., 2020
ion37h	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa12	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa280	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa3263	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa37883	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
uh10	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	24		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	24		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
24	61.6 cM	pdx1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa280 is an allele of pdx1