ZFIN ID: ZDB-GENE-980526-438

Mapping Details

Gene Name:	neuropeptide Y
Symbol:	npy

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	19	22,511,163 - 22,513,427	GRCz12tu
NCBI Map Viewer	19	22,511,163 - 22,513,427	GRCz12tu
Ensembl	19	20,111,746 - 20,114,149	GRCz11
NCBI Map Viewer	19	20,111,746 - 20,114,010	GRCz11
UCSC	19	-	GRCz11
Vega	19	20,527,423 - 20,529,826	GRCv10

Mapped Clones containing npy
DKEY-22M8	Chr: 19 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
ct811	19	20,113,586 - 20,113,603	GRCz11	DIRECT		Chen et al., 2013
kgs1	19	20,113,630 - 20,113,636	GRCz11	DIRECT		Shiozaki et al., 2020
kgs2	19	20,113,628 - 20,113,638	GRCz11	DIRECT		Shiozaki et al., 2020
ct811	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
kgs1	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
kgs2	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
nw17	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	70.6 cM	npy	Mother of Pearl (MOP)	Postlethwait, John H.	Data
19	66.6 cM	npy	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	565	NlaIII	36.0
Forward Primer	CAGGGTGTGATTTTGTACTT
Reverse Primer	CACCCAAAAAGTAAGATTCA

Genomic Feature ct811 is an allele of npy