ZFIN ID: ZDB-GENE-040910-6

Mapping Details

Gene Name:	synaptonemal complex protein 1
Symbol:	sycp1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	6	51,588,915 - 51,597,399	GRCz12tu
NCBI Map Viewer	6	51,588,915 - 51,597,399	GRCz12tu
Ensembl	6	49,052,741 - 49,061,086	GRCz11
NCBI Map Viewer	6	49,052,735 - 49,061,219	GRCz11
UCSC	6	-	GRCz11
Vega	6	49,054,088 - 49,062,433	GRCv10

Mapped Clones containing sycp1
CH211-105J21	Chr: 6 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa7330	6	51,595,888	GRCz12tu	DIRECT		Sealy et al., 2025
	6	49,059,708	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	6	49,061,055	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	6	49,000,308	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa8777	6	51,589,914	GRCz12tu	DIRECT		Sealy et al., 2025
	6	49,053,734	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	6	49,055,081	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	6	48,994,334	Zv9	DIRECT		Busch-Nentwich et al., 2013
t32228	6	49,056,136	GRCz11	DIRECT		Imai et al., 2021
la029242Tg	6	48,995,151 - 48,995,161	Zv9	ZFIN_Zv9	BurgessLin
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa7330	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa8777	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
t32228	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zf3490	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available

Genomic Feature la029242Tg is an allele of sycp1