Genomic Feature
t32228
- ID
- ZDB-ALT-110909-2
- Name
- t32228
- Synonyms
-
- OG039DA (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- Nüsslein-Volhard Lab
- Current Source
- European Zebrafish Resource Center (EZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 6: 49056136 (GRCz11) (1) Details
- Nucleotide change
- A/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- A>T in Exon 15 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ATTACGTCACCTTTCCAAGGAAAACCAGAGAGTCTTAACTTACAAACTTGAACAAACCATGGAAAACCATGAGAAACTTTTTCAAAAGAAAGACACAGAAATAGAGGACCTGAACAACATCAAAGAGCAACGGACAAACCAACTTGCGGATATGCAGCTGACAGTGAATTCTTTGCAGTCCTCACTAACGTCTGAAATACAGAGGTATGTTAAAGAGAGCATATCAGGACAAGTACTAGCATGTTTTGCAAATCCAGCTCAAGCCCATAGCACAAGTAAGCAAGAAATGCAATATTTAAGACCTTAAAAAATTCATGATTCCTTTGTTTTCTTAGGGCACAAGACCTTGAGACAAAACTAAGCTCAGTGATGAATGATCTCAGTGAAAAAAATGCAGAAATAGGTGTGTTAGAACTGTTCGTGTTAAGAAAAAATTACACAGCTGCTGCTTTATACTATTCTAACATCACCGTTTCCACCGTCTCTAATCAGAAGTTACC
A/T AGAGCCAAAATGTGGACCACTGCGAGCAATTACAGATACTCAGAAAAGACCTGGTATATATTTACAGCTGTTTGAGCATTCACATTATTTGCTATATGCATTTATGAAACACAATAGCTACATTTCCATCCACCTATTTTTAAAAAATCACTTTATGGAAACGCCAAGATGCACATAAATCTTGAAAATGCACATAAAAAGAGATAACAGATATGTGCATAACAGATTAGGAAAAACTTTTTATTCGATAAGAAAAGATGCGCATAAACTATGATGGTAACACTTTTACCAAACAAATTACAGTATGAACATTGAAAATGGTCATGTGATGTTATAAGAGATCATGTAATGATAAAAATGTGAGTGAATGGGCAAACCAGAAGGCTGAGCACACTGTAAAACATCTGAAATTTAGTTTTGGTCATGCTAAAACACCTTAACTGTTACAGTATTAGTGTTATTATATTATTAATGACCTCCAGAACTGTCAAGAGCGTCTG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| sycp1t32228/t32228 | Homozygous | ♀+/- ♂+/- | 7 figures  from Saito et al., 2011 | 4 figures from Saito et al., 2011 |
1 - 1 of 1
Show
Supplemental Information
- Genotyping protocol
- None
- Imai, Y., Saito, K., Takemoto, K., Velilla, F., Kawasaki, T., Ishiguro, K.I., Sakai, N. (2021) Sycp1 Is Not Required for Subtelomeric DNA Double-Strand Breaks but Is Required for Homologous Alignment in Zebrafish Spermatocytes. Frontiers in cell and developmental biology. 9:664377
- Saito, K., Siegfried, K.R., Nüsslein-Volhard, C., and Sakai, N. (2011) Isolation and cytogenetic characterization of zebrafish meiotic prophase I mutants. Developmental Dynamics : an official publication of the American Association of Anatomists. 240(7):1779-92
1 - 2 of 2
Show