ZFIN ID: ZDB-GENE-980526-320

Mapping Details

Gene Name:	early growth response 1
Symbol:	egr1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	14	21,332,522 - 21,336,385	GRCz11
Ensembl	14	21,332,522 - 21,336,385	GRCz11
Vega	14	21,035,277 - 21,039,140	GRCv10
NCBI Map Viewer	14	21,333,720 - 21,335,961	GRCz11
UCSC	14	-	GRCz11

Mapped Clones containing egr1
CH211-119C17	Chr: 14 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa64	14	21,334,843	GRCz11	Busch-Nentwich et al., 2013
	14	21,037,598	GRCz10	Busch-Nentwich et al., 2013
	14	22,336,110	Zv9	Busch-Nentwich et al., 2013
sa66	14	21,334,843	GRCz11	Busch-Nentwich et al., 2013
	14	21,037,598	GRCz10	Busch-Nentwich et al., 2013
	14	22,336,110	Zv9	Busch-Nentwich et al., 2013
sa469	14	21,334,424	GRCz11	Busch-Nentwich et al., 2013
	14	21,037,179	GRCz10	Busch-Nentwich et al., 2013
	14	22,335,691	Zv9	Busch-Nentwich et al., 2013
sa42385	14	21,334,541	GRCz11	Busch-Nentwich et al., 2013
	14	21,037,296	GRCz10	Busch-Nentwich et al., 2013
	14	22,335,808	Zv9	Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
14	80.2 cM	egr1	Mother of Pearl (MOP)	Postlethwait, John H.	Data
14	2553.0 cR	egr1	Goodfellow T51 (T51)	Geisler, Robert	Data
14	66.3 cM	egr1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by egr1
fj64b05 Chr: 14 Details

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	820	DdeI	36.0
Forward Primer	GGGAGCAGTTTGATCACCTT
Reverse Primer	GTGAAACGGCCTGTGTAAGA

Genomic Feature sa469 is an allele of egr1