ZFIN ID: ZDB-GENE-020712-1

Mapping Details

Gene Name:	protein associated with LIN7 1, MAGUK p55 family member a
Symbol:	pals1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	17	35,895,624 - 35,951,329	GRCz12tu
NCBI Map Viewer	17	35,895,624 - 35,951,329	GRCz12tu
Ensembl	17	34,206,167 - 34,239,514	GRCz11
NCBI Map Viewer	17	34,186,632 - 34,242,334	GRCz11
UCSC	17	-	GRCz11
Vega	17	34,258,221 - 34,291,568	GRCv10

Mapped Clones containing pals1a
CH211-37L23	Chr: 17 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
m520	17	34,234,220	GRCz11	DIRECT		ZFIN Curated Data
sa2908	17	35,940,507	GRCz12tu	DIRECT		Sealy et al., 2025
	17	34,231,513	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	17	34,283,567	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	17	34,398,643	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa15209	17	35,940,186	GRCz12tu	DIRECT		Sealy et al., 2025
	17	34,231,192	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	17	34,283,246	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	17	34,398,322	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa36468	17	35,947,787	GRCz12tu	DIRECT		Sealy et al., 2025
	17	34,238,792	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	17	34,290,846	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	17	34,405,922	Zv9	DIRECT		Busch-Nentwich et al., 2013
zju203	17	34,216,069 - 34,216,073	GRCz11	DIRECT		Hao et al., 2020
hi2226Tg	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
m227	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
m520	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
rw161	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
rw464	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
s305	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa2908	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa15209	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa36468	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
wi83Tg	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
zju203	17		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z11341	SSLP	17	0.12 cM	Wei et al., 2002	Wei and Malicki (2002. Nat Genet 31:150-157.) report mapping nok to LG17 between z11341 and z4332 using half-tetrad analysis and a high resolution F2 mapping panel. A chromosome walk using BAC and PAC clones identified a 55kb region containing nok and was then sequenced. nok is approximately 0.12cM from z11431 and 1.2cM from z4332.
z4332	SSLP	17	1.2 cM	Wei et al., 2002	Wei and Malicki (2002. Nat Genet 31:150-157.) report mapping nok to LG17 between z11341 and z4332 using half-tetrad analysis and a high resolution F2 mapping panel. A chromosome walk using BAC and PAC clones identified a 55kb region containing nok and was then sequenced. nok is approximately 0.12cM from z11431 and 1.2cM from z4332.

OTHER MAPPING INFORMATION: No data available

Genomic Feature s305 is an allele of pals1a