ZFIN ID: ZDB-GENE-990415-256

ZFIN ID: ZDB-GENE-990415-256

Mapping Details

Gene Name:	nodal-related 1
Symbol:	ndr1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	21	22,478,619 - 22,480,789	GRCz12tu
NCBI Map Viewer	21	22,478,619 - 22,480,789	GRCz12tu
Ensembl	21	21,010,786 - 21,013,085	GRCz11
NCBI Map Viewer	21	21,010,919 - 21,013,085	GRCz11
UCSC	21	-	GRCz11
Vega	21	20,974,150 - 20,976,449	GRCv10

Mapped Clones containing ndr1
CH211-220B15	Chr: 21 Details
CH211-263M18	Chr: 21 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi975Tg	21	21,012,069 - 21,012,070	GRCz11	DIRECT		ZFIN Curated Data
sg7	21	21,012,016 - 21,012,017	GRCz11	DIRECT		Lim et al., 2013
sg27	21	21,010,852 - 21,010,965	GRCz11	DIRECT		Lim et al., 2013
sg32	21	21,010,859 - 21,013,023	GRCz11	DIRECT		Lim et al., 2013
la021868Tg	21	19,839,452 - 19,839,462	Zv9	ZFIN_Zv9	BurgessLin
a175	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
cz35	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
hi975Tg	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
la021868Tg	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
ndr1_unspecified	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sg7	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sg27	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sg32	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
21	62.7 cM	ndr1	Heat Shock (HS)	Woods, Ian G.	Data
21	50.88 cM	ndr1	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by ndr1
zk5k12.sp6 Chr: 6 Details

Genomic Feature ndr1_unspecified is an allele of ndr1