ZFIN Mapping: sk8

ZFIN ID: ZDB-GENE-001207-1

Gene Name:	SPT5 homolog, DSIF elongation factor subunit
Symbol:	supt5h

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	15	22,852,063 - 22,880,118	GRCz12tu
NCBI Map Viewer	15	22,852,063 - 22,880,118	GRCz12tu
Ensembl	15	20,364,595 - 20,395,249	GRCz11
NCBI Map Viewer	15	20,364,605 - 20,395,252	GRCz11
UCSC	15	-	GRCz11
Vega	15	20,428,863 - 20,459,517	GRCv10

Mapped Clones containing supt5h
DKEY-46I14	Chr: 15 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
fh20	15	20,380,102	GRCz11	DIRECT	Cooper et al., 2005
m806	15	20,386,193	GRCz11	DIRECT	Guo et al., 2000
sa13309	15	22,859,136	GRCz12tu	DIRECT	Sealy et al., 2025
	15	20,374,320	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	15	20,438,588	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	15	19,335,962	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa42529	15	22,856,417	GRCz12tu	DIRECT	Sealy et al., 2025
	15	20,371,548	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	15	20,435,816	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	15	19,333,190	Zv9	DIRECT	Busch-Nentwich et al., 2013
sk8	15	20,373,663	GRCz11	DIRECT	Keegan et al., 2002
la012689Tg	15	19,327,746 - 19,327,756	Zv9	ZFIN_Zv9
fh20	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la012689Tg	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
m806	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data
sk8	15		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
z470	SSLP	15	Guo et al., 2000	Guo, et al. (2000. Nature 408:366-369.) report mapping supt5h to LG15 between z470 and z21452. Two AFLP markers were used to identify large clones spanning supt5h and a chromosome walk localized the gene.
z21452	SSLP	15	Guo et al., 2000	Guo, et al. (2000. Nature 408:366-369.) report mapping supt5h to LG15 between z470 and z21452. Two AFLP markers were used to identify large clones spanning supt5h and a chromosome walk localized the gene.
timm50	GENE	15	Guo et al., 2004	Gou et al. (2004, J. Biol. Chem. 279(23):24813-24825) report mapping timm50 to LG15 on the LN54 RH panel. It is near z25911, ppp1r14a and supt5h.
z25911	SSLP	15	Guo et al., 2004	Gou et al. (2004, J. Biol. Chem. 279(23):24813-24825) report mapping timm50 to LG15 on the LN54 RH panel. It is near z25911, ppp1r14a and supt5h.

Chr 15	Guo et al., 2000	Guo, et al. (2000. Nature 408:366-369.) report mapping supt5h to LG15 between z470 and ...
Chr 15	Guo et al., 2004	Gou et al. (2004, J. Biol. Chem. 279(23):24813-24825) report mapping timm50 to LG15 on the ...

Markers Encoded by supt5h
fb95e05 Chr: 15 Details
fc10f02 Chr: 20 Details

Genomic Feature fh20 is an allele of supt5h

Marker	Type	Chr	Distance	Publication / Person	Comments
z20993	SSLP	15		Cooper et al., 2005	...
z7871	SSLP	15		Cooper et al., 2005	...

Genomic Feature fh20 is an allele of supt5h

Chr 15

Cooper%2c+et+al%2e+%282005%2e+Dev%2e+Dyn%2e+234%3a651%2d658%29+reports+mapping+%3ci%3efh20%3c%2fi%3e ...

Mapping Details