FIGURE SUMMARY
Title

Deletion of morpholino binding sites (DeMOBS) to assess specificity of morphant phenotypes

Authors
Cunningham, C.M., Bellipanni, G., Habas, R., Balciunas, D.
Source
Full text @ Sci. Rep.

Partial rescue of Tbx5a-MO4 morphant phenotype by (− 3) and (− 7) binding site mutations. (A) Embryos injected with Tbx5a-MO4 display a range of tbx5a loss of function phenotypes including pectoral fin malformation or absence and severe cardiac edema. Black arrow denotes cardiac edema, black arrowheads denote pectoral fin loss, red arrowheads denote pectoral fin defects. (PFA + E, pectoral fins absent with edema, PFD + E, pectoral fin defect with edema, PFD, pectoral fin defect only) (B) Two sgRNAs, tbx5adeMO1 and tbx5adeMO2 targeting the tbx5a-MO4 binding site (MO sequence shown above in purple, PAM sites are highlighted in magenta, coding sequence is highlighted in green. Tbx5adeMO2 overlaps a RsaI restriction enzyme site used for genotyping. (C) Sequence confirmation of the (− 3) and (− 7) deletion alleles. (D) Titration of Tbx5a-MO4 in wild type (TFL) embryos. Numbers indicate percentages of embryos displaying designated morphant phenotypes. WT is wild-type, E is edema only. (E) Suppression of cardiac and/or pectoral fin phenotypes by the (− 3) and (− 7) binding site deletions at different doses of MO. Adults heterozygous for either the (− 3) or (− 7) deletion were outcrossed and embryos were injected with either 2 ng or 8 ng of tbx5a-MO4. (F) Tbx5a-MO4 is able to at least partly block the translation of mRNAs containing (− 3) and (− 7) binding site mutations. In vitro transcribed mRNAs from each eGFP construct was injected along with mRFP mRNA as a control, and half of the mRNA-injected embryos were then injected with tbx5a-MO4. At 1dpf, embryos displaying similar levels of mRFP expression were photographed. T3, T3 transcription start site, Xβg 5′ UTR and Xβg 3′ UTR, Xenopus β-globin 5′ and 3′ untranslated regions, respectively.

Suppression of a maternal morphant phenotype by DeMOBS. (A) Two sgRNAs, ctnnb2deMO1 and ctnnb2deMO2 target ctnnb2-MO1 binding site. ctnnb2deMO1 overlaps a Bpu10I restriction enzyme site used for genotyping. A single nucleotide polymorphism resulting in a single base mismatch between the MO and the target sequence is shown in lower case. (B) Confirmation of the (− 4) allele by sequence analysis. (C) Co-injection ctnnb2-MO1 and ctnnb1-MO2 into embryos obtained from four female siblings (two wild type and two heterozygous for the deletion) in blind experiments. (D) ciuffo morphant phenotype resulting from injection of ctnnb1-MO2 and ctnnb2-MO1. (EH) Residual phenotypes observed in MO-injected embryos from a female heterozygous for the MO-refractive (− 4) mutation.

Acknowledgments
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