Genomic Feature

sud136

ID
ZDB-ALT-250123-20
Name
sud136
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Akinori Kawamura Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 12
Variants
Variant Type
Delins
Variant Location
Chr 12: 27130268 - 27130291 (GRCz11) (1) Details
Nucleotide change
GACTACAACACCTAACGACGGTCA/TTCTACCACACCT
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp inserted / 24 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTTCTAAACTCGTTCTCAGGGCGCTATCCGAATGGGTCTGACTATCAGTTACTAAATTATGGTACTAACGGCGCTATGAACGCTTCTTACAGGGACTCCACCAGCATGCATTCCGGGTCTTTCGGTTACAACTACAATGGAATAGACCTCAGTGTAAACCGTCCCAACAATGGCCATTTCGGGGCAGTTGGAGATAATTCTCGCGCTTTCCAAAATCCGAGTCAGGAGACCCGGTACAGACAGTCGAGCTGCTCTCTCTCGTCTCCAGATCCTCTGTCTTGTGCCACCAGCGATACTCTGGAATTGAAGGGTTCCTCTCCTCCATCTGATCAGAGCACACCAACCGGCAACAGCAGACTTACCAACAGCAACAATCTTACCAGCAGCAATAGCACACATTTTGCGGACACAGATGAAACCAATGTCTCGTCCGAGACCGAGGAAGGAGCACAGACCACCACCACCAGTCGTACGCAGAAGCAAGAATCTGTGGCGACCTC
GACTACAACACCTAACGACGGTCA/TTCTACCACACCT AACTCCACAGATATTCCCCTGGATGAGGAAGCTGCACATTAGCCATGGTATAAACATCTCTGTATTTTTTTTATTTGGACATGATCAAATGAAAATACAACAGTCCTATCTTAATGATTAGTCTTTTTTTTATTTTAATTTATTTACAGCTTACACGTGGATTAAATGCATGTTTTTCAATTCAGATTTTATTTTAAGTAGTAGTATTCAATTAGCAACCTTCTAATGTTTGTCTTAAAAATTAAAGCTTAAACGGACCATTGAGTTAGCATAAGTATAGGTTAAATAGAGAATAACTACTCTCTGAGAGGCGACTGCATGGTAAATTATTGTGCATCAGTAAAGTCATAAAATGCAATGGTTATAAACCACACATCTTTTTGAATATACATATGAACCAGTAGTCCAACATCCAAAATGTAATGGACGCTTAAGTCCATTTGCGTTTAATGGCTTTGTGATATTTACTTGTTATCTTTTTGCCCTTGCTTATGCCAGAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
hoxb5bsud136/sud136HomozygousUnknownFig. 3 with image from Maeno et al., 2024
hoxb5asud125/sud125; hoxb5bsud136/sud136ComplexFig. 3 with image from Maeno et al., 2024
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Supplemental Information
Genotyping protocol
None
Citations