Genomic Feature

sud165a

ID
ZDB-ALT-250114-8
Name
sud165a
Synonyms
  • sud165 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Akinori Kawamura Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 20915595 - 20915598 (GRCz11) (1) Details
Nucleotide change
CTTT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTTTTGTTACGCTTGGTTATTAGATGCCGAAGCTTAACAACATGGATAAAAATCAAACACACCTTCATAAAAGCGTATGACTCTACCGTTAAAAATATGACTTGTAAAATGGAGGCCATTTAACCGTGAGCACTGGCTAGGCTTTCCCCTTTATCTCCCACGTTCTCTCCCACAGTCACGTGCCTAGCACACCCAATCCAATCTCTGCAGTGATTCAACTTATCAGAGGTCTGTAGTTCACAGCGAAGTCAAGTAGTTAGTTACTTGATTTCAACGGATTCTGCTTTTGAGTCAGTTTCATTGTGGGTGTATCCGTCCGGCTGCTCTCTCTTTACTTGTTTTTGTTATGTCGACATTGGGAACACTAAGTTACTACGCTGACTCACACATTCCACACGAGAATGACGATCATTTGGCACCGAGGTTCTCATCTGGACCCGTGGTCCAGCAGCAGTCTCGTGAACTGACGCTACTTGAATATGGCGAACAAGAGCCCTATA
CTTT/- CCAGGCCAAATCATCCATTTTTGGTGCGTCGTGGAGTCCCGTGCAGCCCACAGGCGCATCTATCGCCTACCACCCATACATTCATCACCCATGTTCAACAGGAGACAGCGATGGAGCATCCGTGCGTCCCTGGGCGTTAGAACCGCTGCCTGCACTGCCATTCACGGGATTATCCACAGATACGCATCAAGATATAAAACTTGAACCATTGGTTGGGAGTGGTGAGTGCACGACTCATACACTTCTTGTGGCTGAGACAGACAACAATACGACGCAAACGGAGAGGAAGGTACCAGACGATGCTGTTTCCAACGGATCACATGATGAGAAAATTCCTGCGGAGACGAAGCTAGATCTAGACCCAAGTAAGTGCAACTAAGGTTAAACCAGAATGTGCATTCAAACGTTCTGGACAGGCTTTGGCTACTTTTGCGTTAACGCATTAATCCTGTCCGATTAAAATTATTTTGCATTAGGGCTAGTTTTGTGAGAAATTTATT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
hoxa10bsud159/sud159; hoxa9bsud165a/sud165a; hoxd10asud160/sud160; hoxd9asud166a/sud166aComplexFig. 3 with image from Adachi et al., 2024
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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