Genomic Feature
zf3330
- ID
- ZDB-ALT-211207-4
- Name
- zf3330
- Synonyms
-
- -4+3 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one MNV (1)
- Protocol
- embryos treated with
- Lab of Origin
- Lingfei Luo Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- MNV
- Variant Location
- Chr 13: 15982653 - 15982656 (GRCz11) (1) Details
- Nucleotide change
- CTTG/GCC
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 3 bp inserted / 4 bp deleted (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TCAGTTTGAACAACCAGTTTGACTAAATGGAAAATAGTTCATTTTTACACTTAAAAATATTCTAGAACTAAAATTCGAAAGTTATATACTGTATAACAAATGAAAACAAACATCAAGCAGATGAAAGAAATAGGCACAATCTAATTGCAAAAGCTGAAGATGCGAGTTTTAATCTAATTTAAACGATTCTGACCCCCTCGAGTGTGTTTGAAAAATCTAGTGCACTCGCTCTGTGATCTTGCAGGGAGGATGAGAGACGTTACATGCACTCTTTCATTCCCCGTGTTGCATTTGAAAGTTTTTTGCATTAAGCTGACATTAAGAGGGAGCTGCAGTGGGTGCTATATCAGTCTAAGCATTGCATGTATGTGTAAATGAGGTAGTTTTGTGGTCATGTCCCAGCTTAGACTGGCCTGACTCACCCAGTGGTTTATCTGTGCGATTGTTGTGTTGGAGGCCAGTGCTTGCTGACAAGTCTTCAGGAACAGGCATGGCCTCAT
CTTG/GCC ATCCTCTCCGCCTTCATTAGCATTCATCGGGCTGTCTCTTCCTAAAAACATAATAAAGAAGATACCAATACAGATTCAGACACAGCCCTCCTACACCATATGCCATAGTGGAAATTAAATTAAAGAGTCATGCATGGAATATGTTATGTTGTGGCAACTATGTTTTATACATACACTAATATATGTAAAATGTTACAGAAGTGTTTTATTCATGAATGACATAAATATTGTCAGTTATCTGTCAAATCTGTTCTAAAATTGCACTGGAGAATGAATTTTTGAATTTGACCGATCAAAGAACATCTGTTCTCGACTCAACAACTCTTAACTTAACTGATTCAAATTATTAATGATTGAATTATTAATTTAGAGCACTTCTAAATTAAAAAACAAAACAAAACAAATCTGTCCAGAGCAGAAAATGATTCAATTGGATTAAAATGAAGCTACTAGAATATTTTTGTGGGCACATAAAGCAAAAAGAAATACTTTATTCGACA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| ikzf1zf3330/zf3330 | Homozygous | ♀+/- ♂+/- | 2 figures from Huang et al., 2019 | 6 figures from Huang et al., 2019 | |
| ikzf1zf3330/zf3330; cq28Tg; nz117Tg | Complex | Fig. 2 from Huang et al., 2019 | |||
| ikzf1zf3330/zf3330; la2Tg | Complex | Fig. 5 from Huang et al., 2019 | |||
| ikzf1zf3330/zf3330; la2Tg; zf3328Tg | Complex | Fig. 5 from Huang et al., 2019 | |||
| ikzf1zf3330/zf3330; zf3328Tg | Complex | Fig. 5 from Huang et al., 2019 | Fig. 5 from Huang et al., 2019 | ||
| ikzf1zf3330/zf3330; zf3328Tg; zf3329Tg | Complex | Fig. 7 from Huang et al., 2019 | |||
| ikzf1zf3330/zf3330; zf3329Tg | Complex | Fig. 7 from Huang et al., 2019 | |||
| ccr9azf3332/zf3332; ikzf1zf3330/zf3330; zf3329Tg | Complex | Fig. 7 from Huang et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None