Genomic Feature

ecn8

ID
ZDB-ALT-211116-5
Name
ecn8
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Zhen-Yu Du Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 4541650 - 4541654 (GRCz11) (1) Details
Nucleotide change
GGAGT/-
Variant Notes
Between the 70bp and 75bp of the wild-type pnpla2 coding sequence, GGAGT is  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 1 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTCGAGGAAACACTTCAAATGACAGCTGAGTGAAAGTGGATGGGGTCGAAAAACGCGCCTTCTGATTGGCTTATCTCTCCTCGGCCACGCCCAAAGTCAACATGACCCTCCCTACTGGTGTTTGTGACCTGTTCAGTGCGTGACGGCGACGAGCACGTCAAAACACCGGTCATTGTACGTACGCAAAGTTATTTAACAAGCCGAGGAGAAAAAAACACAAGTTCGGTTCACACCCGAGAAGCTCCTGTCAGTGTTTGGTTGTCACTTTGGAAACTTTTTAAACGCGAAACGACGGTGTTTATGCGACCAGAAGCTCTCGCGAATGTCATGTATGGATCAACCGTTATGTGTCAAGCGCGCGACACAGTGTAAACGAAAGTGATTCTGTAAAATCCAGAAGGATTTGTTGACTTTACCCAAAGATTATCATCATGTTCCCACTGGACTCCCCGTGGAATATTTCGTTCGCAGGCTGTGGTTTTCTGGGTATTTATCACATC
GGAGT/- GGCCAGCTGTCTACAGGAGCACGCGCCGTTTCTGGTCGAGAACGCGCGTCATATTTACGGCGCGTCCGCGGGCGCGCTCACGGCCTCCGCGCTGGTCACCGGAGCCTGTTTAGGTAAACTCACGCTGTTATGTAGCAAAATATGTGTTTTAAATGATTAACAATGTCCATGTGGTTTTAGCAGTTATTATTAAGTTTATTCGCCATGGTAAATGTTAGGTATTCTTTGATTAGAGAATAATTTAAGAAGCGCAATGTGTTTTCATGACAGATTTATAGTAATATTGTGATTTACGATGGCACTGAAGACAAGTTGAAGTACCGCTTCATTTTATTTTTTACTTCCTGAAATACCATGGTATTAAAGTGAATATAATCACGCCATTATCACGTAAAAACACACATATTAAACTCAACATTTTACTTTTATAATATATTATTATTTTGGCGTAACAGTAAGGACATTTGTGAATATATATTTATTTAAAATATGACCACGTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations