Genomic Feature
ecn8
- ID
- ZDB-ALT-211116-5
- Name
- ecn8
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Zhen-Yu Du Lab
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 25: 4541650 - 4541654 (GRCz11) (1) Details
- Nucleotide change
- GGAGT/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted in Exon 1 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TTCGAGGAAACACTTCAAATGACAGCTGAGTGAAAGTGGATGGGGTCGAAAAACGCGCCTTCTGATTGGCTTATCTCTCCTCGGCCACGCCCAAAGTCAACATGACCCTCCCTACTGGTGTTTGTGACCTGTTCAGTGCGTGACGGCGACGAGCACGTCAAAACACCGGTCATTGTACGTACGCAAAGTTATTTAACAAGCCGAGGAGAAAAAAACACAAGTTCGGTTCACACCCGAGAAGCTCCTGTCAGTGTTTGGTTGTCACTTTGGAAACTTTTTAAACGCGAAACGACGGTGTTTATGCGACCAGAAGCTCTCGCGAATGTCATGTATGGATCAACCGTTATGTGTCAAGCGCGCGACACAGTGTAAACGAAAGTGATTCTGTAAAATCCAGAAGGATTTGTTGACTTTACCCAAAGATTATCATCATGTTCCCACTGGACTCCCCGTGGAATATTTCGTTCGCAGGCTGTGGTTTTCTGGGTATTTATCACATC
GGAGT/- GGCCAGCTGTCTACAGGAGCACGCGCCGTTTCTGGTCGAGAACGCGCGTCATATTTACGGCGCGTCCGCGGGCGCGCTCACGGCCTCCGCGCTGGTCACCGGAGCCTGTTTAGGTAAACTCACGCTGTTATGTAGCAAAATATGTGTTTTAAATGATTAACAATGTCCATGTGGTTTTAGCAGTTATTATTAAGTTTATTCGCCATGGTAAATGTTAGGTATTCTTTGATTAGAGAATAATTTAAGAAGCGCAATGTGTTTTCATGACAGATTTATAGTAATATTGTGATTTACGATGGCACTGAAGACAAGTTGAAGTACCGCTTCATTTTATTTTTTACTTCCTGAAATACCATGGTATTAAAGTGAATATAATCACGCCATTATCACGTAAAAACACACATATTAAACTCAACATTTTACTTTTATAATATATTATTATTTTGGCGTAACAGTAAGGACATTTGTGAATATATATTTATTTAAAATATGACCACGTG - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
pnpla2ecn8/ecn8 (AB) | Homozygous | ♀+/- ♂+/- | 3 figures from Han et al., 2021 | 2 figures from Han et al., 2021 |
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Supplemental Information
- Genotyping protocol
- None