Genomic Feature

ia302

ID
ZDB-ALT-210921-17
Name
ia302
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Tiso Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 25
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 8509015 - 8509030 (GRCz11) (1) Details
Nucleotide change
GGAGCGGCTCGTGGTC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
16 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GAAATAGCTCCAGATGAAATATTTTGTTTTGTGTTTACCTTATTATTAAAGTTGTTGCACGTCCACCGTTTCCTGCCTCTGAATGAGCAAGGTTTAGCTTGTTTTGCTTTGAAAAAACAAAACACCAGCAAAGAAACTCGACACACAGGAACATAGTGTTATTGCAGAGCAACACAAACAGCACACAGAAGTATAAATGCACAGCGCCACACAAGGCAAGCACCGTCAGTCATGCTGATCACTCGACGCAGAAGTATAAACCAGCCTTTTACGTACATTCATTCATTTACTTATCCAGGAAGTTTTTACGCAGTGGATGCCCTTCCAGCCGCAACCCATCTCTGGGAAACCTTTTATGTGCAATATGTCCTAATTTCTTAATTTTAAAGACCAAAGAATTTGACTATTGTTGCATCCCAAGAATCAAATTAAGAAATTAATGTCACCTTGAGTAAGTACTGCTCTTTAATGTGTGCCCGGTCAAAGCTCACATTGTGTCC
GGAGCGGCTCGTGGTC/- TTCCACTCACCGCCCCTCGGCTGGCTGGAGTTTGCGAGGGTTTCCAGCGGGATGAGATCAGCCAGCGACAGGTCACTTGACCAGGCATACCGATCCTCCACCAGCCTGTGACTGCACCACGAGTACCTCAAATACAAAATACAAAAAAACTATTAGTTTGGAATCAAAGCTAAAATTTGACCTGTTAGTGAGAGACGAAAAAGATTTAGGGCTGCACAATACATCCTTTCAGCATCGATACATTCGCAATAGTCACACTGCAAGATCTCCAACGTCAAATCTGAAGTACAGTTGACTAGAAGTAAATTAATGATGTAACAATCAACCAATGATGGCATAAAGACCGCCTTCTGATGATTGATAGACACTCTCATTTGCATGCTGAGCTGAGGAAAAGTAAATACAGAACTACATTCAAGAATGAACAAACATTTGAAAGGGGGGAATAAACTTTCAGTTCAGCATTTTCTTATTCCTTCAACATTTGTGAAATTTATTAG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
polgia302/ia302Homozygous♀+/- ♂+/-Fig. 2 with image from Facchinello et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations