Genomic Feature
uq20rp
- ID
- ZDB-ALT-210414-1
- Name
- uq20rp
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Parton Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 24: 40664202 - 40664203 (GRCz11) (1) Details
- Nucleotide change
- CT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TCATGTTACCAAAGTGCATGATGGCACCAGTCAGCTTGTAGATGCCTGATTTTTCATCTTGTGTGAAGCCCAGCACATCAAAGGCATCCTGTCATTTGAAAACAGCATGTCACACCAATAAGATCAGTCTACTTTTATTTGACTTTTCGTAGTACGTATCACTGGCCCCAATCTATGTATATGATTTTGATGAGGTTGACAGATTGATTGGCTTCCTCATCAGACTTTGGAGATTTTAGCTGTTTTGATTACACATCAGCCTAATGTATTTTAATCAATCGGCATGAAGGCTAAACAGGGGTTGGCTAAACATATTGGTCAAAAAAATCATCATATATTGTCCATCAGCTAAATATTCCTCCATTTAGTCGATGGACAATTTTTCAAGATTTTGACCAATATTCTTAGTCAACCTCTGTTTTCTTAGCCAGAGAAAAACCATATCAGTCAACCTCTATTTTGATAATAATGAATTTCACTAACGTCAGTGGCAATCAACT
CT/- TCGGCATCATCAATCGATGCCACTTGCGTCTCTCCTTGGGAGATGTAGGAGTAATCATAGGGGTTGTTGGTGATGAGCAACATCTCTGTAAAGAACAGGCAGTACAGTTAGAGACAGTGTATAGGCACACTTTAAAATGGTATATTTAATTCCACACCGATACCTACCCAGTAGCTCCGGTTTCTTCTGAGACAGGATCTGGTAGAAGATGTGGTAGTCTCTCTCAGCTTTGAGCTGATAAGTGACACGAGACTTCTCAAGCAGGTCTACACGATGAAATTTAGCAAAGTTAATGCAGTGTTAAATATATTTTATGTGCTATTGGAGTCTTCTAATTATCATAATAGTAGTAATATAAAGCATACTCACAAGTTTCAATATCTGCTGAGGCCAGTTTTCCACTCACACCAAAGTGAATTCGGATAAATTTACCCTGTTTATAATTGAAAATAATAATCACATTATTCATACTAATAGGGTATATGCCGAAGCATGCTAAT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| smyhc1uq20rp/uq20rp | Homozygous | ♀+/- ♂+/- | |||
| smyhc1uq20rp/uq20rp; uq22rpTg | Complex | Fig. 4  from Hall et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None