Genomic Feature

ula1

ID
ZDB-ALT-210215-1
Name
ula1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Amati Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 1
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 51036262 - 51036268 (GRCz11) (1) Details
Nucleotide change
CCGCCTT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTAAATTTGAGATTTAAACAGTTAAATGCTAATGAATTGTTATTCTGATGGCCTGGTTGGGCCAATCAGAAATGTCTATAACTTGGCATATAAAAAAATAATGAATCTTAGCCACATTTTAAATAATGAGTCAAAACAAGCCTTTTTTCAACAGATTTCTTTAAAAGAAGAAGCTTTAAAAATTATAATAAACTAAATATAAATAAACTTACATAAATATTTAAAACGATTTAAGACCTGCAAGACATTTTATCAGAAAATTTGAGAACTTTTGAGGCCTAAAATTTTATATTTAAAATTTAAGACATATTAGGAGCTCACAGACACGCTGTCCTTTACATCTGACAATTCTGACTTTCTTCTTGCAGTTTTGTAATAAGCCGTGTAATAATGTTTACACACTAACAGAAATCAATATGACTGAATAATCTCACCAGCTCCAGTGACCTGAATCTGGATGCCCTTCTCCAGTTCAGCGATGCCTTTTCTGTACCACTGCA
CCGCCTT/- CTGCTTATCACCTACAACAAAACACAGATAACACACAGTAAAGCACAGTAAATATTAAGACCGCCACCACAAAAACTATCACAACAAGGTCACACAGACCACTTGCAAACTTTCAGAAACGTTTCACATCACAGGTTTTATTCTGTAATATTATATTGTCAGCGCTGAAAGTTGGAAAGATTTACTTAAATTAATCAGTACGTGCTAAAAGTCATGCATGGCTCAGCCATGTGGCCCTGGGCATGATGGAGCACTGCTGATGATGATGAAGCTATTGAACTGAGCTCTTTGTTTTTACTGATGCTGCTGCTGGCATCTCTCCAAACTACACAGACAAAAACAACACGACCACATGATATGAGCAGTGGAGCAAATCCAGCTCACAATTTAATTAAACACTTTTTAAATATATAATTACATACTTTTTCAGTCATGTAGTTTAAAGTCTAAATGTTTGCACCTTAAAACATTGTTTTTTTCTTTTTCTTTTTGCCTGAATT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
spastula1/ula1Homozygous♀+/- ♂+/-3 figures with image from Arribat et al., 20202 figures with image from Arribat et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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