Genomic Feature

dw213

ID
ZDB-ALT-200925-4
Name
dw213
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Gallagher Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 9
Variants
Variant Type
Small Deletion
Variant Location
Chr 9: 1668739 - 1668879 (GRCz11) (1) Details
Nucleotide change
GCAGGACATGGATCTGATCGATATCCTGTGGCGGCAGGATGTGGATC TGGGCGCGGGCCGTGAGGTGTTCGACTTCAGCTACCGGCAGAAGGAGGTGGAGCTGCGCA GGCGGAGGGAGCAGGAGGAGCAGGAGCTGCAGGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
141 bp deleted (1)
Transcript Consequence
Inframe Deletion (1)
Protein Consequence
Amino Acid Deletion (1)
Sequences
Flanking Sequence
CTCCTCCTCCTCACCATTTCTGTTTGTTGTCATAACTGACAGCTGGAGGGGCGTGGTTAAGTATGTTAACCACGCCCACTATATCTGACTGACCTAATCTGAGGATTTAGCTGAAAACAAAGAGGGAGTGCATTTTCAGATCTTAATTATTAGGCCAAACACTTGTTTCTTAATGACATGCACAGATGAATTGTTCATCATTAAACTAGCAATGTGAGCTGACAAAGTTAATATGGTTTGTTTTGATTTCATGGGGACTTTAAACTCTCCTCAAATGCCTTTAAAACACAAGCACAGGATAAAGTTTCACTCTGATATTGTTATACTTTGCAGTGACTCTACAAATCTCTTGTATTCTTAAATACTGTAATCCCAACTCAACATTGTGTATGCTGTGATGACTATTGCGCGCGCACACACACAGTGTGATATCCATGCTGAAGTGATATTATTGTGCAGCCCTAGTGTGTGATGCCTGACCTCTGATGTCTGTTTTCTCT
GCAGGACATGGATCTGATCGATATCCTGTGGCGGCAGGATGTGGATC TGGGCGCGGGCCGTGAGGTGTTCGACTTCAGCTACCGGCAGAAGGAGGTGGAGCTGCGCA GGCGGAGGGAGCAGGAGGAGCAGGAGCTGCAGGA/- GCGTCTGCAGGAGCAGGAGAAGACACTGCTGGCTCAGCTGCAGCTCGACGAGGAGACCGGAGAGTTCCTGCCGCGCAGCACACCGCTCACACACACACCTGAAGCAGACGGAGGAGGAGCGGGAGAAATCACACAGGTACACATGCACACACAGCAGACAATGTAGAACCCACACAGGTACACATACAAACAATTACACACACATGCACAAATAACACACAGATCTATCCTGTGAGATTTGACACAAATGCCCAAACATACACACACACAAACATACAGGAACACACACAAACAAAGCAGACAATACACACGTACATACATTCACAAGCGCACACACAGATGTACAAATACACACACTCACCCACACATGTGTATATATATTTACAGAAGCACACACGCACATAAATACACACATACATGTACATAAACACAGTTGCACGCACACACAAACACACACAAACAAATATACACAGATGTACAAATACACAAACTCACCCACC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nfe2l2adw213/dw213 (EKW)Homozygous♀+/- ♂+/-2 figures from Mills et al., 20192 figures from Mills et al., 2019
nfe2l2adw213/+ (AB)Heterozygous♀+/- ♂+/-
nfe2l2adw213/+ (EKW)Heterozygous♀-/- ♂+/+Fig. 3 from Mills et al., 2019
nfe2l2adw213/+ (EKW)Heterozygous♀+/- ♂+/-Table 1 from Mills et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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